Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. Superfamily b.36.1: PDZ domain-like [50156] (7 families) (S)
    peptide-binding domain
  5. Family b.36.1.1: PDZ domain [50157] (47 proteins)
    Pfam PF00595
  6. Protein automated matches [190055] (6 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [187785] (51 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2eeg:
  2. Domain(s) for 2ejy:
  3. Domain(s) for 2ev8:
  4. Domain(s) for 2exg:
  5. Domain(s) for 2h2b:
  6. Domain(s) for 2h2c:
  7. Domain(s) for 2h3m:
  8. Domain(s) for 2he2:
    1. Domain d2he2a1: 2he2 A:418-513 [204544]
      Other proteins in same PDB: d2he2a2, d2he2a3, d2he2b2, d2he2b3
      automated match to d1pdra_
    2. Domain d2he2b1: 2he2 B:418-513 [204545]
      Other proteins in same PDB: d2he2a2, d2he2a3, d2he2b2, d2he2b3
      automated match to d1pdra_
  9. Domain(s) for 2he4:
  10. Domain(s) for 2iwq:
  11. Domain(s) for 2jxo:
  12. Domain(s) for 2kbs:
  13. Domain(s) for 2kpk:
  14. Domain(s) for 2kpl:
  15. Domain(s) for 2m3m:
  16. Domain(s) for 2ocs:
  17. Domain(s) for 2ozf:
  18. Domain(s) for 2pa1:
  19. Domain(s) for 2pkt:
  20. Domain(s) for 2vph:
    1. Domain d2vpha1: 2vph A:513-606 [168757]
      Other proteins in same PDB: d2vpha2, d2vphb2, d2vphb3
      automated match to d2cs5a1
    2. Domain d2vphb1: 2vph B:513-606 [168758]
      Other proteins in same PDB: d2vpha2, d2vphb2, d2vphb3
      automated match to d2cs5a1
  21. Domain(s) for 2vrf:
    1. Domain d2vrfa1: 2vrf A:112-200 [168768]
      Other proteins in same PDB: d2vrfa2, d2vrfa3, d2vrfb2, d2vrfb3, d2vrfc2, d2vrfc3, d2vrfd2, d2vrfd3
      automated match to d1qava_
      complexed with edo
    2. Domain d2vrfb1: 2vrf B:112-200 [168769]
      Other proteins in same PDB: d2vrfa2, d2vrfa3, d2vrfb2, d2vrfb3, d2vrfc2, d2vrfc3, d2vrfd2, d2vrfd3
      automated match to d1qava_
      complexed with edo
    3. Domain d2vrfc1: 2vrf C:112-200 [168770]
      Other proteins in same PDB: d2vrfa2, d2vrfa3, d2vrfb2, d2vrfb3, d2vrfc2, d2vrfc3, d2vrfd2, d2vrfd3
      automated match to d1qava_
      complexed with edo
    4. Domain d2vrfd1: 2vrf D:112-200 [168771]
      Other proteins in same PDB: d2vrfa2, d2vrfa3, d2vrfb2, d2vrfb3, d2vrfc2, d2vrfc3, d2vrfd2, d2vrfd3
      automated match to d1qava_
      complexed with edo
  22. Domain(s) for 2w4f:
  23. Domain(s) for 2x7z:
  24. Domain(s) for 2yt7:
  25. Domain(s) for 2yt8:
  26. Domain(s) for 3i4w:
    1. Domain d3i4wa_: 3i4w A: [178090]
      automated match to d1tp3a1
      complexed with act
    2. Domain d3i4wb_: 3i4w B: [178091]
      automated match to d1tp3a1
      complexed with act
    3. Domain d3i4wc_: 3i4w C: [178092]
      automated match to d1tp3a1
      complexed with act
    4. Domain d3i4wd_: 3i4w D: [178093]
      automated match to d1tp3a1
      complexed with act
  27. Domain(s) for 3k82:
  28. Domain(s) for 3rl7:
    1. Domain d3rl7a_: 3rl7 A: [185006]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
    2. Domain d3rl7b1: 3rl7 B:220-310 [185007]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
    3. Domain d3rl7c_: 3rl7 C: [185008]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
    4. Domain d3rl7d1: 3rl7 D:220-310 [185009]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
    5. Domain d3rl7e_: 3rl7 E: [185010]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
    6. Domain d3rl7f1: 3rl7 F:220-309 [185011]
      Other proteins in same PDB: d3rl7b2, d3rl7d2, d3rl7f2
      automated match to d1zoka1
  29. Domain(s) for 3rl8:
    1. Domain d3rl8a_: 3rl8 A: [185012]
      automated match to d1qlca_
    2. Domain d3rl8b_: 3rl8 B: [185013]
      automated match to d1qlca_
    3. Domain d3rl8c_: 3rl8 C: [185014]
      automated match to d1qlca_
    4. Domain d3rl8d_: 3rl8 D: [185015]
      automated match to d1qlca_
    5. Domain d3rl8e_: 3rl8 E: [185016]
      automated match to d1qlca_
  30. Domain(s) for 4jl7:
  31. Domain(s) for 4lmm:
  32. Domain(s) for 4mpa:
  33. Domain(s) for 4n6x:
  34. Domain(s) for 4oeo:
    1. Domain d4oeoa1: 4oeo A:18-110 [268492]
      Other proteins in same PDB: d4oeoa2, d4oeob2, d4oeoc2
      automated match to d2h2ba_
      complexed with 12p, act, so4
    2. Domain d4oeob1: 4oeo B:18-110 [268495]
      Other proteins in same PDB: d4oeoa2, d4oeob2, d4oeoc2
      automated match to d2h2ba_
      complexed with 12p, act, so4
    3. Domain d4oeoc1: 4oeo C:18-110 [268496]
      Other proteins in same PDB: d4oeoa2, d4oeob2, d4oeoc2
      automated match to d2h2ba_
      complexed with 12p, act, so4
  35. Domain(s) for 4oep:
    1. Domain d4oepa1: 4oep A:18-110 [268502]
      Other proteins in same PDB: d4oepa2, d4oepa3, d4oepb2, d4oepb3
      automated match to d2rrma_
      complexed with 12p, act
    2. Domain d4oepb1: 4oep B:18-110 [268514]
      Other proteins in same PDB: d4oepa2, d4oepa3, d4oepb2, d4oepb3
      automated match to d2rrma_
      complexed with 12p, act
  36. Domain(s) for 4p0c:
  37. Domain(s) for 4pqw:
  38. Domain(s) for 4q2o:
    1. Domain d4q2oa_: 4q2o A: [259471]
      automated match to d2eega_
    2. Domain d4q2ob_: 4q2o B: [259472]
      automated match to d2eega_
    3. Domain d4q2oc_: 4q2o C: [263610]
      automated match to d4q2oa_
    4. Domain d4q2od_: 4q2o D: [261254]
      automated match to d2eega_
    5. Domain d4q2oe_: 4q2o E: [263611]
      automated match to d4q2oa_
    6. Domain d4q2of_: 4q2o F: [263612]
      automated match to d4q2oa_
  39. Domain(s) for 4q3h:
    1. Domain d4q3ha_: 4q3h A: [257610]
      automated match to d2ozfa_
    2. Domain d4q3hb_: 4q3h B: [263629]
      automated match to d2ozfa_
  40. Domain(s) for 4yyx:
    1. Domain d4yyxa1: 4yyx A:18-120 [271160]
      Other proteins in same PDB: d4yyxa2, d4yyxb2
      automated match to d2h2ba_
      complexed with fmt
    2. Domain d4yyxb1: 4yyx B:18-120 [271161]
      Other proteins in same PDB: d4yyxa2, d4yyxb2
      automated match to d2h2ba_
      complexed with fmt
  41. Domain(s) for 6hks:
    1. Domain d6hksa_: 6hks A: [369117]
      automated match to d2vphb_
      complexed with iod
    2. Domain d6hksb_: 6hks B: [369116]
      automated match to d2vphb_
      complexed with iod
    3. Domain d6hksc_: 6hks C: [369144]
      automated match to d2vphb_
      complexed with iod
    4. Domain d6hksd_: 6hks D: [369122]
      automated match to d2vphb_
      complexed with iod
    5. Domain d6hkse_: 6hks E: [369115]
      automated match to d2vphb_
      complexed with iod
    6. Domain d6hksf_: 6hks F: [369121]
      automated match to d2vphb_
      complexed with iod
  42. Domain(s) for 6lca:
    1. Domain d6lcaa_: 6lca A: [395253]
      automated match to d3fy5a_
      complexed with so4
    2. Domain d6lcab_: 6lca B: [395252]
      automated match to d3fy5a_
      complexed with so4
    3. Domain d6lcac_: 6lca C: [395271]
      automated match to d3fy5a_
      complexed with so4
    4. Domain d6lcad_: 6lca D: [395299]
      automated match to d3fy5a_
      complexed with so4
    5. Domain d6lcae_: 6lca E: [395263]
      automated match to d3fy5a_
      complexed with so4
    6. Domain d6lcaf_: 6lca F: [395334]
      automated match to d3fy5a_
      complexed with so4
    7. Domain d6lcag_: 6lca G: [395254]
      automated match to d3fy5a_
      complexed with so4
    8. Domain d6lcah_: 6lca H: [395210]
      automated match to d3fy5a_
      complexed with so4
  43. Domain(s) for 6lcb:
  44. Domain(s) for 6nh9:
    1. Domain d6nh9a1: 6nh9 A:487-571 [378595]
      Other proteins in same PDB: d6nh9a2, d6nh9b2
      automated match to d1kwaa_
    2. Domain d6nh9b1: 6nh9 B:487-571 [378612]
      Other proteins in same PDB: d6nh9a2, d6nh9b2
      automated match to d1kwaa_
    3. Domain d6nh9c_: 6nh9 C: [378609]
      Other proteins in same PDB: d6nh9a2, d6nh9b2
      automated match to d1kwaa_
  45. Domain(s) for 6zbq:
    1. Domain d6zbqa1: 6zbq A:243-335 [407477]
      Other proteins in same PDB: d6zbqa2, d6zbqa3, d6zbqb2
      automated match to d2kawa_
      complexed with qe2
    2. Domain d6zbqb1: 6zbq B:245-335 [407556]
      Other proteins in same PDB: d6zbqa2, d6zbqa3, d6zbqb2
      automated match to d2kawa_
      complexed with qe2
  46. Domain(s) for 6zbz:
    1. Domain d6zbza1: 6zbz A:244-335 [407442]
      Other proteins in same PDB: d6zbza2, d6zbzb2, d6zbzc2, d6zbzd2
      automated match to d2kawa_
      complexed with edo, qe5
    2. Domain d6zbzb1: 6zbz B:244-335 [407406]
      Other proteins in same PDB: d6zbza2, d6zbzb2, d6zbzc2, d6zbzd2
      automated match to d2kawa_
      complexed with edo, qe5
    3. Domain d6zbzc1: 6zbz C:244-335 [407467]
      Other proteins in same PDB: d6zbza2, d6zbzb2, d6zbzc2, d6zbzd2
      automated match to d2kawa_
      complexed with edo, qe5
    4. Domain d6zbzd1: 6zbz D:246-335 [407486]
      Other proteins in same PDB: d6zbza2, d6zbzb2, d6zbzc2, d6zbzd2
      automated match to d2kawa_
      complexed with edo, qe5
  47. Domain(s) for 6zc3:
    1. Domain d6zc3a1: 6zc3 A:244-335 [407448]
      Other proteins in same PDB: d6zc3a2, d6zc3b2
      automated match to d2kawa_
      complexed with edo, jor
    2. Domain d6zc3b1: 6zc3 B:244-335 [407460]
      Other proteins in same PDB: d6zc3a2, d6zc3b2
      automated match to d2kawa_
      complexed with edo, jor
  48. Domain(s) for 6zc4:
    1. Domain d6zc4a1: 6zc4 A:243-335 [407436]
      Other proteins in same PDB: d6zc4a2, d6zc4a3, d6zc4b2
      automated match to d2kawa_
      complexed with qez
    2. Domain d6zc4b1: 6zc4 B:245-335 [407520]
      Other proteins in same PDB: d6zc4a2, d6zc4a3, d6zc4b2
      automated match to d2kawa_
      complexed with qez
  49. Domain(s) for 6zc6:
  50. Domain(s) for 6zc7:
    1. Domain d6zc7a1: 6zc7 A:244-335 [407491]
      Other proteins in same PDB: d6zc7a2, d6zc7b2
      automated match to d2kawa_
      complexed with v31
    2. Domain d6zc7b1: 6zc7 B:243-335 [407529]
      Other proteins in same PDB: d6zc7a2, d6zc7b2
      automated match to d2kawa_
      complexed with v31
  51. Domain(s) for 6zc8:
    1. Domain d6zc8a1: 6zc8 A:243-335 [407578]
      Other proteins in same PDB: d6zc8a2, d6zc8b2
      automated match to d2kawa_
      complexed with qek
    2. Domain d6zc8b1: 6zc8 B:246-335 [407526]
      Other proteins in same PDB: d6zc8a2, d6zc8b2
      automated match to d2kawa_
      complexed with qek

More info for Species Human (Homo sapiens) [TaxId:9606] from b.36.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.36.1.1 automated matches: