SCOPe 2.06: Domain d1dnpb1: 1dnp B:201-469

Lineage for d1dnpb1 (1dnp B:201-469)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
   multihelical; consists of two all-alpha subdomains

4. Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (2 families)
   automatically mapped to Pfam PF03441

5. Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain [48174] (3 proteins)

6. Protein C-terminal domain of DNA photolyase [48175] (3 species)
   N-terminal domain is alpha/beta and binds a light-harvesting cofactor

7. Species Escherichia coli [TaxId:562] [48176] (1 PDB entry)

8. Domain d1dnpb1: 1dnp B:201-469 [18776]
   Other proteins in same PDB: d1dnpa2, d1dnpb2
   complexed with fad, mhf

Details for d1dnpb1

PDB Entry: 1dnp, 2.3 Å

PDB Description: structure of deoxyribodipyrimidine photolyase

PDB Compounds: (B:) DNA photolyase

SCOPe Domain Sequences for d1dnpb1:

Sequence; same for both SEQRES and ATOM records:

>d1dnpb1 a.99.1.1 (B:201-469) C-terminal domain of DNA photolyase {Escherichia coli [TaxId: 562]}
pveekaaiaqlrqfcqngageyeqqrdfpavegtsrlsaslatgglsprqclhrllaeqp
qaldggagsvwlneliwrefyrhlityhpslckhrpfiawtdrvqwqsnpahlqawqegk
tgypivdaamrqlnstgwmhnrlrmitasflvkdllidwregeryfmsqlidgdlaanng
gwqwaastgtdaapyfrifnpttqgekfdhegefirqwlpelrdvpgkvvhepwkwaqka
gvtldypqpivehkearvqtlaayeaark

Timeline for d1dnpb1:

• d1dnpb1 first appeared (with stable ids) in SCOP 1.55
  
• d1dnpb1 appears in SCOPe 2.05
  
• d1dnpb1 appears in SCOPe 2.07
  
• d1dnpb1 appears in the current release, SCOPe 2.08