Lineage for Species: Turnip yellow mosaic virus [TaxId: 12155]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2076068Family b.121.4.6: Tymoviridae-like VP [88641] (2 protein domains)
    automatically mapped to Pfam PF00983
  6. 2076088Protein automated matches [190649] (1 species)
    not a true protein
  7. 2076089Species Turnip yellow mosaic virus [TaxId:12155] [187728] (2 PDB entries)

PDB entries in Species: Turnip yellow mosaic virus [TaxId: 12155]:

  1. Domain(s) for 2fz1:
    1. 2076093Domain d2fz1a_: 2fz1 A: [164513]
      automated match to d1auyb_
    2. 2076094Domain d2fz1b_: 2fz1 B: [164514]
      automated match to d1auyb_
    3. 2076095Domain d2fz1c_: 2fz1 C: [164515]
      automated match to d1auyb_
  2. Domain(s) for 2fz2:
    1. 2076090Domain d2fz2a_: 2fz2 A: [164516]
      automated match to d1auyb_
      protein/RNA complex
    2. 2076091Domain d2fz2b_: 2fz2 B: [164517]
      automated match to d1auyb_
      protein/RNA complex
    3. 2076092Domain d2fz2c_: 2fz2 C: [164518]
      automated match to d1auyb_
      protein/RNA complex

More info for Species Turnip yellow mosaic virus [TaxId:12155] from b.121.4.6 automated matches

Timeline for Species Turnip yellow mosaic virus [TaxId:12155] from b.121.4.6 automated matches: