Lineage for Species: Human rotavirus a [TaxId: 10941]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2373039Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2373040Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2375103Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2375104Protein automated matches [190437] (55 species)
    not a true protein
  7. 2375499Species Human rotavirus a [TaxId:10941] [187643] (8 PDB entries)

PDB entries in Species: Human rotavirus a [TaxId: 10941]:

  1. Domain(s) for 2dwr:
  2. Domain(s) for 4yfz:
  3. Domain(s) for 4yg0:
  4. Domain(s) for 5gj6:
    1. 2375507Domain d5gj6a_: 5gj6 A: [322176]
      automated match to d2dwra_
      complexed with so4
    2. 2375508Domain d5gj6b_: 5gj6 B: [322177]
      automated match to d2dwra_
      complexed with so4
    3. 2375509Domain d5gj6c_: 5gj6 C: [322198]
      automated match to d2dwra_
      complexed with so4
    4. 2375510Domain d5gj6d_: 5gj6 D: [322200]
      automated match to d2dwra_
      complexed with so4
    5. 2375511Domain d5gj6e_: 5gj6 E: [322175]
      automated match to d2dwra_
      complexed with so4
    6. 2375512Domain d5gj6f_: 5gj6 F: [322225]
      automated match to d2dwra_
      complexed with so4
    7. 2375513Domain d5gj6g_: 5gj6 G: [322236]
      automated match to d2dwra_
      complexed with so4
    8. 2375514Domain d5gj6h_: 5gj6 H: [322233]
      automated match to d2dwra_
      complexed with so4
  5. Domain(s) for 5vki:
    1. 2375503Domain d5vkia_: 5vki A: [341423]
      automated match to d2dwra_
      complexed with gal, gol, nag, nga, so4, thr
    2. 2375504Domain d5vkib_: 5vki B: [341426]
      automated match to d2dwra_
      complexed with gal, gol, nag, nga, so4, thr
  6. Domain(s) for 5vks:
    1. 2375505Domain d5vksa_: 5vks A: [341375]
      automated match to d2dwra_
      complexed with fuc, gal, glc, gol, nag, so4
    2. 2375506Domain d5vksb_: 5vks B: [341399]
      automated match to d2dwra_
      complexed with fuc, gal, glc, gol, nag, so4
  7. Domain(s) for 5yms:
    1. 3051667Domain d5ymse_: 5yms E: [351729]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    2. 3051670Domain d5ymsd_: 5yms D: [351732]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    3. 3051673Domain d5ymsa_: 5yms A: [351735]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    4. 3051677Domain d5ymsh_: 5yms H: [351739]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    5. 3051680Domain d5ymsf_: 5yms F: [351742]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    6. 3051717Domain d5ymsb_: 5yms B: [351779]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    7. 3051724Domain d5ymsg_: 5yms G: [351786]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
    8. 3051739Domain d5ymsc_: 5yms C: [351801]
      automated match to d5gj6a_
      complexed with a2g, gal, nag
  8. Domain(s) for 5ymt:
    1. 3051641Domain d5ymtc_: 5ymt C: [351703]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    2. 3051642Domain d5ymtd_: 5ymt D: [351704]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    3. 3051644Domain d5ymtf_: 5ymt F: [351706]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    4. 3051647Domain d5ymtb_: 5ymt B: [351709]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    5. 3051654Domain d5ymth_: 5ymt H: [351716]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    6. 3051664Domain d5ymtm_: 5ymt M: [351726]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    7. 3051666Domain d5ymtk_: 5ymt K: [351728]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    8. 3051675Domain d5ymtn_: 5ymt N: [351737]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    9. 3051692Domain d5ymta_: 5ymt A: [351754]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    10. 3051726Domain d5ymti_: 5ymt I: [351788]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    11. 3051727Domain d5ymte_: 5ymt E: [351789]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    12. 3051741Domain d5ymtg_: 5ymt G: [351803]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    13. 3051742Domain d5ymtl_: 5ymt L: [351804]
      automated match to d5gj6a_
      complexed with gal, glc, nag
    14. 3051752Domain d5ymtj_: 5ymt J: [351814]
      automated match to d5gj6a_
      complexed with gal, glc, nag

More info for Species Human rotavirus a [TaxId:10941] from b.29.1.0 automated matches

Timeline for Species Human rotavirus a [TaxId:10941] from b.29.1.0 automated matches: