SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Agrobacterium tumefaciens [TaxId: 358]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2161993Superfamily d.17.4: NTF2-like [54427] (31 families) (S)
    has a beta-alpha(2)-beta insertion after the main helix
  5. 2162681Family d.17.4.26: VirB8-like [160029] (2 protein domains)
    Pfam PF04335
  6. 2162701Protein automated matches [190553] (1 species)
    not a true protein
  7. 2162702Species Agrobacterium tumefaciens [TaxId:358] [187535] (1 PDB entry)

PDB entry in Species: Agrobacterium tumefaciens [TaxId: 358]:

More info for Species Agrobacterium tumefaciens [TaxId:358] from d.17.4.26 automated matches

Timeline for Species Agrobacterium tumefaciens [TaxId:358] from d.17.4.26 automated matches: