SCOPe 2.08: Species: Human (Homo sapiens) [TaxId: 9606]

Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.110: Profilin-like [55769] (10 superfamilies)
core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families)
alpha-beta(2)-alpha(2)-beta(3)
Family d.110.3.0: automated matches [191387] (1 protein)
not a true family
Protein automated matches [190492] (24 species)
not a true protein
Species Human (Homo sapiens) [TaxId:9606] [187434] (30 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

Domain(s) for 1x0o:
- Domain d1x0oa1: 1x0o A:5-119 [240938]
  Other proteins in same PDB: d1x0oa2
  automated match to d3h82b_
Domain(s) for 2a24:
- Domain d2a24b_: 2a24 B: [241185]
  Other proteins in same PDB: d2a24a_
  automated match to d3f1nb_
Domain(s) for 2b02:
- Domain d2b02a_: 2b02 A: [162954]
  automated match to d1p97a_
Domain(s) for 2hv1:
1. Domain d2hv1a_: 2hv1 A: [242077]
  automated match to d3h82b_
2. Domain d2hv1b_: 2hv1 B: [242078]
  automated match to d3h82b_
Domain(s) for 2k7s:
- Domain d2k7sa1: 2k7s A:5-119 [242405]
  Other proteins in same PDB: d2k7sa2
  automated match to d3h82b_
Domain(s) for 2kdk:
- Domain d2kdka_: 2kdk A: [242471]
  automated match to d3f1nb_
Domain(s) for 3f1n:
- Domain d3f1nb_: 3f1n B: [175410]
  Other proteins in same PDB: d3f1na1, d3f1na2
  automated match to d1p97a_
  complexed with edo
Domain(s) for 3f1o:
- Domain d3f1ob_: 3f1o B: [175412]
  Other proteins in same PDB: d3f1oa1, d3f1oa2
  automated match to d1p97a_
  complexed with 2xy, edo
Domain(s) for 3f1p:
- Domain d3f1pb_: 3f1p B: [175414]
  Other proteins in same PDB: d3f1pa1, d3f1pa2
  automated match to d1p97a_
Domain(s) for 3h7w:
- Domain d3h7wb_: 3h7w B: [177315]
  Other proteins in same PDB: d3h7wa1, d3h7wa2
  automated match to d1p97a_
  protein/DNA complex; complexed with 018
Domain(s) for 3h82:
- Domain d3h82b1: 3h82 B:356-467 [177317]
  Other proteins in same PDB: d3h82a1, d3h82a2, d3h82b2
  automated match to d1p97a_
  protein/DNA complex; complexed with 020
Domain(s) for 4eq1:
1. Domain d4eq1a1: 4eq1 A:357-464 [196838]
  Other proteins in same PDB: d4eq1a2, d4eq1b2
  automated match to d3h82b_
  complexed with pe5
2. Domain d4eq1b1: 4eq1 B:357-464 [201946]
  Other proteins in same PDB: d4eq1a2, d4eq1b2
  automated match to d4eq1a_
  complexed with pe5
Domain(s) for 4ghi:
- Domain d4ghib_: 4ghi B: [196637]
  Other proteins in same PDB: d4ghia1, d4ghia2
  automated match to d3h82b_
  complexed with 0x3
Domain(s) for 4gs9:
- Domain d4gs9b_: 4gs9 B: [222118]
  Other proteins in same PDB: d4gs9a1, d4gs9a2
  automated match to d3f1nb_
  complexed with 0xb, pe8
Domain(s) for 4h6j:
- Domain d4h6jb1: 4h6j B:357-466 [193345]
  Other proteins in same PDB: d4h6ja_, d4h6jb2
  automated match to d3f1nb_
Domain(s) for 4lpz:
1. Domain d4lpza_: 4lpz A: [257846]
  automated match to d1x0oa_
2. Domain d4lpzb_: 4lpz B: [262964]
  automated match to d1x0oa_
Domain(s) for 4wn5:
1. Domain d4wn5a1: 4wn5 A:237-343 [275696]
  Other proteins in same PDB: d4wn5a2
  automated match to d1p97a_
  complexed with mvc, p6g, so4
2. Domain d4wn5b_: 4wn5 B: [275698]
  Other proteins in same PDB: d4wn5a2
  automated match to d1p97a_
  complexed with mvc, p6g, so4
Domain(s) for 4xt2:
1. Domain d4xt2b_: 4xt2 B: [280107]
  Other proteins in same PDB: d4xt2a1, d4xt2a2, d4xt2c1, d4xt2c2
  automated match to d1x0oa_
  complexed with 43l
2. Domain d4xt2d_: 4xt2 D: [280104]
  Other proteins in same PDB: d4xt2a1, d4xt2a2, d4xt2c1, d4xt2c2
  automated match to d1x0oa_
  complexed with 43l
Domain(s) for 5j7e:
1. Domain d5j7ea_: 5j7e A: [317060]
  automated match to d4hp4b_
2. Domain d5j7eb_: 5j7e B: [317042]
  automated match to d4hp4b_
3. Domain d5j7ec_: 5j7e C: [317035]
  automated match to d4hp4b_
4. Domain d5j7ed_: 5j7e D: [317010]
  automated match to d4hp4b_
5. Domain d5j7ee_: 5j7e E: [317123]
  automated match to d4hp4b_
6. Domain d5j7ef_: 5j7e F: [317031]
  automated match to d4hp4b_
Domain(s) for 5tbm:
- Domain d5tbmb_: 5tbm B: [323138]
  Other proteins in same PDB: d5tbma_
  automated match to d3f1nb_
  complexed with 79a
Domain(s) for 5ufp:
- Domain d5ufpb_: 5ufp B: [329124]
  Other proteins in same PDB: d5ufpa_
  automated match to d3f1nb_
  complexed with 86d
Domain(s) for 6czw:
- Domain d6czwb_: 6czw B: [359527]
  Other proteins in same PDB: d6czwa1, d6czwa2
  automated match to d3f1nb_
  complexed with fo7
Domain(s) for 6d09:
- Domain d6d09b_: 6d09 B: [359515]
  Other proteins in same PDB: d6d09a1, d6d09a2
  automated match to d3f1nb_
  complexed with foj
Domain(s) for 6d0b:
- Domain d6d0bb_: 6d0b B: [359568]
  Other proteins in same PDB: d6d0ba1, d6d0ba2
  automated match to d3f1nb_
  complexed with fov
Domain(s) for 6d0c:
- Domain d6d0cb_: 6d0c B: [359582]
  Other proteins in same PDB: d6d0ca1, d6d0ca2
  automated match to d3f1nb_
Domain(s) for 6x21:
- Domain d6x21b_: 6x21 B: [407247]
  Other proteins in same PDB: d6x21a1, d6x21a2
  automated match to d3f1nb_
  complexed with ukj
Domain(s) for 6x28:
- Domain d6x28b_: 6x28 B: [407234]
  Other proteins in same PDB: d6x28a1, d6x28a2
  automated match to d3f1nb_
  complexed with ulg
Domain(s) for 6x2h:
- Domain d6x2hb_: 6x2h B: [407395]
  Other proteins in same PDB: d6x2ha1, d6x2ha2
  automated match to d3f1nb_
  complexed with uld
Domain(s) for 6x37:
- Domain d6x37b_: 6x37 B: [407239]
  Other proteins in same PDB: d6x37a1, d6x37a2
  automated match to d3f1nb_
  complexed with uls
Domain(s) for 6x3d:
- Domain d6x3db_: 6x3d B: [407300]
  Other proteins in same PDB: d6x3da1, d6x3da2
  automated match to d3f1nb_
  complexed with ulm

More info for Species Human (Homo sapiens) [TaxId:9606] from d.110.3.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.110.3.0 automated matches:

Species Human (Homo sapiens) [TaxId:9606] from d.110.3.0 automated matches first appeared in SCOPe 2.01
Species Human (Homo sapiens) [TaxId:9606] from d.110.3.0 automated matches appears in SCOPe 2.07