Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2124334Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 protein domains)
    contains Pfam PF00929
  6. 2124711Protein automated matches [190162] (5 species)
    not a true protein
  7. 2124722Species Escherichia coli [TaxId:562] [187263] (14 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 2gui:
  2. Domain(s) for 2ido:
    1. 2124726Domain d2idoa_: 2ido A: [137284]
      Other proteins in same PDB: d2idob_, d2idod_
      automated match to d1j53a_
      complexed with edo, mn, tmp
    2. 2124727Domain d2idoc_: 2ido C: [137286]
      Other proteins in same PDB: d2idob_, d2idod_
      automated match to d1j53a_
      complexed with edo, mn, tmp
  3. Domain(s) for 2xy8:
  4. Domain(s) for 3c94:
  5. Domain(s) for 3c95:
  6. Domain(s) for 3k5l:
  7. Domain(s) for 3k5m:
  8. Domain(s) for 3k5n:
    1. 2124747Domain d3k5na1: 3k5n A:1-389 [247113]
      Other proteins in same PDB: d3k5na2, d3k5nb2, d3k5nb3
      automated match to d1q8ia1
      protein/DNA complex
    2. 2124748Domain d3k5nb1: 3k5n B:1-389 [247115]
      Other proteins in same PDB: d3k5na2, d3k5nb2, d3k5nb3
      automated match to d1q8ia1
      protein/DNA complex
  9. Domain(s) for 3ngy:
    1. 2124728Domain d3ngya_: 3ngy A: [247917]
      automated match to d2f96a1
      complexed with co; mutant
    2. 2124729Domain d3ngyb_: 3ngy B: [247918]
      automated match to d2f96a1
      complexed with co; mutant
    3. 2124730Domain d3ngyc_: 3ngy C: [247919]
      automated match to d2f96a1
      complexed with co; mutant
    4. 2124731Domain d3ngyd_: 3ngy D: [247920]
      automated match to d2f96a1
      complexed with co; mutant
  10. Domain(s) for 3ngz:
    1. 2124737Domain d3ngza_: 3ngz A: [247921]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with co, mg
    2. 2124738Domain d3ngzb_: 3ngz B: [247922]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with co, mg
  11. Domain(s) for 3nh0:
    1. 2124743Domain d3nh0a_: 3nh0 A: [247923]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
    2. 2124744Domain d3nh0b_: 3nh0 B: [247924]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
  12. Domain(s) for 3nh1:
    1. 2124733Domain d3nh1a_: 3nh1 A: [247925]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with mg
    2. 2124734Domain d3nh1b_: 3nh1 B: [247926]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with mg
    3. 2124735Domain d3nh1c_: 3nh1 C: [247927]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with mg
    4. 2124736Domain d3nh1d_: 3nh1 D: [247928]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex; complexed with mg
  13. Domain(s) for 3nh2:
    1. 2124739Domain d3nh2a_: 3nh2 A: [247929]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
    2. 2124740Domain d3nh2b_: 3nh2 B: [247930]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
    3. 2124741Domain d3nh2e_: 3nh2 E: [247931]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
    4. 2124742Domain d3nh2f_: 3nh2 F: [247932]
      automated match to d2f96a1
      protein/DNA complex; protein/RNA complex
  14. Domain(s) for 4kb1:

More info for Species Escherichia coli [TaxId:562] from c.55.3.5 automated matches

Timeline for Species Escherichia coli [TaxId:562] from c.55.3.5 automated matches: