Lineage for Species: Human immunodeficiency virus 1 [TaxId: 11676]

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1273716Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 1273717Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families) (S)
  5. 1273718Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)
  6. 1273825Protein automated matches [190369] (6 species)
    not a true protein
  7. 1273826Species Human immunodeficiency virus 1 [TaxId:11676] [187207] (6 PDB entries)

PDB entries in Species: Human immunodeficiency virus 1 [TaxId: 11676]:

  1. Domain(s) for 2pxr:
  2. Domain(s) for 2x2d:
    1. 1273831Domain d2x2dd_: 2x2d D: [169823]
      Other proteins in same PDB: d2x2db_, d2x2dc_
      automated match to d1afva_
    2. 1273832Domain d2x2de_: 2x2d E: [169824]
      Other proteins in same PDB: d2x2db_, d2x2dc_
      automated match to d1afva_
  3. Domain(s) for 2xde:
    1. 1273828Domain d2xdea_: 2xde A: [170044]
      automated match to d1m9xc_
      complexed with 1b0
    2. 1273829Domain d2xdeb_: 2xde B: [170045]
      automated match to d1m9xc_
      complexed with 1b0
  4. Domain(s) for 3nte:
    1. 1273833Domain d3ntea1: 3nte A:1-147 [233045]
      Other proteins in same PDB: d3ntea2, d3nteb2
      automated match to d1e6jp2
      complexed with fe, i3m, iod, na
    2. 1273834Domain d3nteb1: 3nte B:1-147 [233042]
      Other proteins in same PDB: d3ntea2, d3nteb2
      automated match to d1e6jp2
      complexed with fe, i3m, iod, na
  5. Domain(s) for 3p05:
    1. 1273835Domain d3p05b1: 3p05 B:1-147 [233141]
      Other proteins in same PDB: d3p05b2, d3p05c2
      automated match to d1e6jp2
      complexed with iod
    2. 1273836Domain d3p05c1: 3p05 C:1-147 [233143]
      Other proteins in same PDB: d3p05b2, d3p05c2
      automated match to d1e6jp2
      complexed with iod
    3. 1273837Domain d3p05d1: 3p05 D:1-147 [233142]
      Other proteins in same PDB: d3p05b2, d3p05c2
      automated match to d1e6jp2
  6. Domain(s) for 4b4n:

More info for Species Human immunodeficiency virus 1 [TaxId:11676] from a.73.1.1 automated matches

Timeline for Species Human immunodeficiency virus 1 [TaxId:11676] from a.73.1.1 automated matches: