Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2518968Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families) (S)
  5. 2518969Family d.58.7.1: Canonical RBD [54929] (70 protein domains)
    Pfam PF00076
    Pfam PF13893
  6. 2519437Protein automated matches [190332] (5 species)
    not a true protein
  7. 2519440Species Human (Homo sapiens) [TaxId:9606] [187155] (29 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1nrc:
    1. 2519503Domain d1nrca_: 1nrc A: [302778]
      automated match to d1dz5a_
    2. 2519504Domain d1nrcb_: 1nrc B: [302779]
      automated match to d1dz5a_
  2. Domain(s) for 1wtb:
  3. Domain(s) for 1x0f:
  4. Domain(s) for 2ek1:
    1. 2519456Domain d2ek1a1: 2ek1 A:875-949 [164107]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    2. 2519457Domain d2ek1b1: 2ek1 B:875-949 [164108]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    3. 2519458Domain d2ek1c1: 2ek1 C:875-949 [164109]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    4. 2519459Domain d2ek1d1: 2ek1 D:874-949 [164110]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    5. 2519460Domain d2ek1e1: 2ek1 E:875-949 [164111]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    6. 2519461Domain d2ek1f1: 2ek1 F:875-949 [164112]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    7. 2519462Domain d2ek1g1: 2ek1 G:876-949 [164113]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
    8. 2519463Domain d2ek1h1: 2ek1 H:875-949 [164114]
      Other proteins in same PDB: d2ek1a2, d2ek1b2, d2ek1c2, d2ek1d2, d2ek1e2, d2ek1f2, d2ek1g2, d2ek1h2
      automated match to d2cqpa1
  5. Domain(s) for 2ek6:
    1. 2519487Domain d2ek6a1: 2ek6 A:13-87 [164121]
      Other proteins in same PDB: d2ek6a2, d2ek6b2, d2ek6c2, d2ek6d2
      automated match to d2cqpa1
    2. 2519488Domain d2ek6b1: 2ek6 B:13-87 [164122]
      Other proteins in same PDB: d2ek6a2, d2ek6b2, d2ek6c2, d2ek6d2
      automated match to d2cqpa1
    3. 2519489Domain d2ek6c1: 2ek6 C:13-87 [164123]
      Other proteins in same PDB: d2ek6a2, d2ek6b2, d2ek6c2, d2ek6d2
      automated match to d2cqpa1
    4. 2519490Domain d2ek6d1: 2ek6 D:13-87 [164124]
      Other proteins in same PDB: d2ek6a2, d2ek6b2, d2ek6c2, d2ek6d2
      automated match to d2cqpa1
  6. Domain(s) for 2j0s:
  7. Domain(s) for 2kxn:
  8. Domain(s) for 2kyx:
  9. Domain(s) for 2lyv:
    1. 2519514Domain d2lyva1: 2lyv A:2-98 [243047]
      Other proteins in same PDB: d2lyva3
      automated match to d1u1qa1
    2. 2519515Domain d2lyva2: 2lyv A:99-196 [243048]
      Other proteins in same PDB: d2lyva3
      automated match to d1u1qa2
  10. Domain(s) for 2mhn:
  11. Domain(s) for 2mju:
    1. 2519519Domain d2mjua1: 2mju A:325-444 [264407]
      automated match to d1qm9a1
    2. 2519520Domain d2mjua2: 2mju A:445-531 [264408]
      automated match to d2adca2
  12. Domain(s) for 3h2v:
    1. 2519491Domain d3h2ve1: 3h2v E:59-130 [177160]
      Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_, d3h2ve2, d3h2vf2, d3h2vg2, d3h2vh2
      automated match to d1wi6a1
      protein/RNA complex
    2. 2519492Domain d3h2vf1: 3h2v F:59-130 [177161]
      Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_, d3h2ve2, d3h2vf2, d3h2vg2, d3h2vh2
      automated match to d1wi6a1
      protein/RNA complex
    3. 2519493Domain d3h2vg1: 3h2v G:59-130 [177162]
      Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_, d3h2ve2, d3h2vf2, d3h2vg2, d3h2vh2
      automated match to d1wi6a1
      protein/RNA complex
    4. 2519494Domain d3h2vh1: 3h2v H:59-130 [177163]
      Other proteins in same PDB: d3h2va_, d3h2vb_, d3h2vc_, d3h2vd_, d3h2ve2, d3h2vf2, d3h2vg2, d3h2vh2
      automated match to d1wi6a1
      protein/RNA complex
  13. Domain(s) for 3k0j:
    1. 2519495Domain d3k0ja_: 3k0j A: [247088]
      automated match to d1dz5a_
      protein/RNA complex; complexed with mg, tpp
    2. 2519496Domain d3k0jb_: 3k0j B: [247089]
      automated match to d1dz5a_
      protein/RNA complex; complexed with mg, tpp
    3. 2519497Domain d3k0jc_: 3k0j C: [247090]
      automated match to d1dz5a_
      protein/RNA complex; complexed with mg, tpp
    4. 2519498Domain d3k0jd_: 3k0j D: [247091]
      automated match to d1dz5a_
      protein/RNA complex; complexed with mg, tpp
  14. Domain(s) for 3lpy:
    1. 2519466Domain d3lpya1: 3lpy A:5-82 [180503]
      Other proteins in same PDB: d3lpya2, d3lpyb2
      automated match to d2cqba1
      complexed with epe, so4
    2. 2519467Domain d3lpyb1: 3lpy B:5-82 [180504]
      Other proteins in same PDB: d3lpya2, d3lpyb2
      automated match to d2cqba1
      complexed with epe, so4
  15. Domain(s) for 3lqv:
    1. 2519485Domain d3lqva_: 3lqv A: [180519]
      automated match to d2f9da1
      complexed with ade
    2. 2519486Domain d3lqvb_: 3lqv B: [180520]
      automated match to d2f9da1
      complexed with ade
  16. Domain(s) for 3mdf:
    1. 2519446Domain d3mdfa_: 3mdf A: [181019]
      automated match to d2cqba1
    2. 2519447Domain d3mdfb_: 3mdf B: [181020]
      automated match to d2cqba1
  17. Domain(s) for 3s7r:
    1. 2519483Domain d3s7ra_: 3s7r A: [200592]
      automated match to d3s7rb_
      complexed with unl
    2. 2519484Domain d3s7rb_: 3s7r B: [196248]
      automated match to d1hd0a_
      complexed with unl
  18. Domain(s) for 3ulh:
  19. Domain(s) for 3zzy:
    1. 2519441Domain d3zzya_: 3zzy A: [218621]
      automated match to d1sjra_
      protein/RNA complex
    2. 2519442Domain d3zzyb_: 3zzy B: [218622]
      automated match to d1sjra_
      protein/RNA complex
  20. Domain(s) for 3zzz:
    1. 2519444Domain d3zzza_: 3zzz A: [218623]
      automated match to d1sjra_
      protein/RNA complex; complexed with iod
    2. 2519445Domain d3zzzb_: 3zzz B: [218624]
      automated match to d1sjra_
      protein/RNA complex; complexed with iod
  21. Domain(s) for 4cko:
    1. 2519448Domain d4ckoa2: 4cko A:337-444 [307128]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    2. 2519449Domain d4ckob3: 4cko B:337-444 [307130]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    3. 2519450Domain d4ckoc3: 4cko C:337-444 [307132]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    4. 2519451Domain d4ckod3: 4cko D:337-444 [307134]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    5. 2519452Domain d4ckoe3: 4cko E:337-444 [307136]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    6. 2519453Domain d4ckof3: 4cko F:337-444 [307138]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    7. 2519454Domain d4ckog3: 4cko G:337-444 [307140]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
    8. 2519455Domain d4ckoh3: 4cko H:337-444 [307142]
      Other proteins in same PDB: d4ckoa3, d4ckob4, d4ckoc4, d4ckod4, d4ckoe4, d4ckof4, d4ckog4, d4ckoh4
      automated match to d1qm9a1
      complexed with cl, zn
  22. Domain(s) for 4cq1:
    1. 2519468Domain d4cq1a1: 4cq1 A:337-444 [236982]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    2. 2519469Domain d4cq1b1: 4cq1 B:336-444 [236983]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    3. 2519470Domain d4cq1c1: 4cq1 C:337-444 [236985]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    4. 2519471Domain d4cq1d1: 4cq1 D:337-444 [236988]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    5. 2519472Domain d4cq1e1: 4cq1 E:337-444 [236984]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    6. 2519473Domain d4cq1f1: 4cq1 F:337-444 [236986]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    7. 2519474Domain d4cq1g1: 4cq1 G:337-444 [236987]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
    8. 2519475Domain d4cq1h1: 4cq1 H:337-444 [236989]
      Other proteins in same PDB: d4cq1a2, d4cq1b2, d4cq1c2, d4cq1d2, d4cq1e2, d4cq1f2, d4cq1g2, d4cq1h2
      automated match to d4ckob1
      complexed with cl, zn
  23. Domain(s) for 4iuf:
  24. Domain(s) for 4lir:
    1. 2519500Domain d4lira_: 4lir A: [253601]
      automated match to d1wwha1
    2. 2519501Domain d4lirb_: 4lir B: [253602]
      automated match to d1wwha1
  25. Domain(s) for 4w90:
  26. Domain(s) for 4yud:
  27. Domain(s) for 4zka:
    1. 2519477Domain d4zkaa_: 4zka A: [319169]
      automated match to d2erra1
      complexed with mes, pg4, so4
    2. 2519478Domain d4zkab_: 4zka B: [319173]
      automated match to d2erra1
      complexed with mes, pg4, so4
    3. 2519479Domain d4zkac_: 4zka C: [319154]
      automated match to d2erra1
      complexed with mes, pg4, so4
    4. 2519480Domain d4zkad_: 4zka D: [319184]
      automated match to d2erra1
      complexed with mes, pg4, so4
    5. 2519481Domain d4zkae_: 4zka E: [319155]
      automated match to d2erra1
      complexed with mes, pg4, so4
    6. 2519482Domain d4zkaf_: 4zka F: [319190]
      automated match to d2erra1
      complexed with mes, pg4, so4
  28. Domain(s) for 5im0:
    1. 2519464Domain d5im0a_: 5im0 A: [320430]
      Other proteins in same PDB: d5im0b2, d5im0b3
      automated match to d3s7ra_
    2. 2519465Domain d5im0b1: 5im0 B:77-156 [320575]
      Other proteins in same PDB: d5im0b2, d5im0b3
      automated match to d3s7ra_
  29. Domain(s) for 5oo6:
    1. 2519505Domain d5oo6b_: 5oo6 B: [341619]
      automated match to d1h2ux_
      complexed with mgt
    2. 2519506Domain d5oo6e_: 5oo6 E: [341755]
      automated match to d1h2ux_
      complexed with mgt
    3. 2519507Domain d5oo6h_: 5oo6 H: [341632]
      automated match to d1h2ux_
      complexed with mgt
    4. 2519508Domain d5oo6k_: 5oo6 K: [341640]
      automated match to d1h2ux_
      complexed with mgt
    5. 2519509Domain d5oo6n_: 5oo6 N: [341625]
      automated match to d1h2ux_
      complexed with mgt
    6. 2519510Domain d5oo6q_: 5oo6 Q: [341648]
      automated match to d1h2ux_
      complexed with mgt
    7. 2519511Domain d5oo6t_: 5oo6 T: [341641]
      automated match to d1h2ux_
      complexed with mgt
    8. 2519512Domain d5oo6w_: 5oo6 W: [341634]
      automated match to d1h2ux_
      complexed with mgt

More info for Species Human (Homo sapiens) [TaxId:9606] from d.58.7.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.58.7.1 automated matches: