Lineage for Species: Human (Homo sapiens) [TaxId: 9606]
- Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds) 
Fold d.3: Cysteine proteinases [54000] (1 superfamily)
consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-AsnSuperfamily d.3.1: Cysteine proteinases [54001] (24 families) 
the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
Family d.3.1.1: Papain-like [54002] (26 proteins) 
Protein automated matches [190264] (12 species)
not a true protein
Species Human (Homo sapiens) [TaxId:9606] [187102] (9 PDB entries)
PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:
- Domain(s) for 2c0y:
Domain d2c0ya_: 2c0y A: [203682]
automated match to d1by8a_
mutant
- Domain(s) for 2fq9:
Domain d2fq9a_: 2fq9 A: [133941]
automated match to d1ms6a_
complexed with crj
Domain d2fq9b_: 2fq9 B: [133942]
automated match to d1ms6a_
complexed with crj
- Domain(s) for 2fra:
Domain d2fraa_: 2fra A: [133978]
automated match to d1ms6a_
complexed with crv
Domain d2frab_: 2fra B: [133979]
automated match to d1ms6a_
complexed with crv
- Domain(s) for 2frq:
Domain d2frqa_: 2frq A: [133999]
automated match to d1ms6a_
complexed with c71
Domain d2frqb_: 2frq B: [134000]
automated match to d1ms6a_
complexed with c71
- Domain(s) for 2ft2:
Domain d2ft2a_: 2ft2 A: [134054]
automated match to d1ms6a_
complexed with c28
Domain d2ft2b_: 2ft2 B: [134055]
automated match to d1ms6a_
complexed with c28
- Domain(s) for 2fud:
Domain d2fuda_: 2fud A: [134117]
automated match to d1ms6a_
complexed with crl
Domain d2fudb_: 2fud B: [134118]
automated match to d1ms6a_
complexed with crl
- Domain(s) for 3pdf:
Domain d3pdfa2: 3pdf A:206-439 [233217]
Other proteins in same PDB: d3pdfa1, d3pdfa3
automated match to d1jqpa2
complexed with cl, lxv, nag
- Domain(s) for 6jd0:
Domain d6jd0a_: 6jd0 A: [379776]
automated match to d1cs8a_
complexed with cl, edo, eoh, gol, na, pge, po4, pol; mutant
- Domain(s) for 6jd8:
Domain d6jd8a1: 6jd8 A:1-316 [379750]
Other proteins in same PDB: d6jd8a2
automated match to d1cs8a_
complexed with edo, eoh, gol, peg, pge; mutant
More info for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.1 automated matches
Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.1 automated matches:
- Species Human (Homo sapiens) [TaxId:9606] from d.3.1.1 automated matches first appeared in SCOPe 2.01
- Species Human (Homo sapiens) [TaxId:9606] from d.3.1.1 automated matches appears in SCOPe 2.06
- Species Human (Homo sapiens) [TaxId:9606] from d.3.1.1 automated matches appears in the current release, SCOPe 2.08