Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2045654Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2047511Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2047551Family b.34.13.2: Chromo domain [54165] (8 protein domains)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 2047596Protein Heterochromatin protein 1, HP1 [54166] (4 species)
    duplication: consists of two homologous domains, N-terminal chromo domain and C-terminal chromo shadow domain
  7. 2047604Species Human (Homo sapiens) [TaxId:9606] [187099] (3 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2fmm:
    1. 2047605Domain d2fmma_: 2fmm A: [133782]
      Other proteins in same PDB: d2fmme1, d2fmme2
      automated match to d1s4za_
      complexed with so4
    2. 2047606Domain d2fmmb_: 2fmm B: [133783]
      Other proteins in same PDB: d2fmme1, d2fmme2
      automated match to d1s4za_
      complexed with so4
    3. 2047607Domain d2fmmc_: 2fmm C: [133784]
      Other proteins in same PDB: d2fmme1, d2fmme2
      automated match to d1s4za_
      complexed with so4
    4. 2047608Domain d2fmmd_: 2fmm D: [133785]
      Other proteins in same PDB: d2fmme1, d2fmme2
      automated match to d1s4za_
      complexed with so4
  2. Domain(s) for 3f2u:
  3. Domain(s) for 3q6s:
    1. 2047610Domain d3q6sa_: 3q6s A: [184231]
      automated match to d1s4za_
    2. 2047611Domain d3q6sb_: 3q6s B: [184232]
      automated match to d1s4za_
    3. 2047612Domain d3q6sc_: 3q6s C: [184233]
      automated match to d1s4za_
    4. 2047613Domain d3q6sd_: 3q6s D: [184234]
      automated match to d1s4za_

More info for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 Heterochromatin protein 1, HP1

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.34.13.2 Heterochromatin protein 1, HP1: