Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1888974Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 1888975Superfamily d.3.1: Cysteine proteinases [54001] (23 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 1889773Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 1889774Protein automated matches [190230] (17 species)
    not a true protein
  7. 1889788Species Human (Homo sapiens) [TaxId:9606] [187072] (30 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2etl:
  2. Domain(s) for 2nqd:
  3. Domain(s) for 2xu3:
  4. Domain(s) for 2xu4:
  5. Domain(s) for 2xu5:
  6. Domain(s) for 2y5b:
    1. 1889829Domain d2y5ba_: 2y5b A: [170606]
      Other proteins in same PDB: d2y5bb1, d2y5bb2, d2y5bf1, d2y5bf2
      automated match to d2ibia1
      complexed with so4, zn
    2. 1889830Domain d2y5be_: 2y5b E: [170607]
      Other proteins in same PDB: d2y5bb1, d2y5bb2, d2y5bf1, d2y5bf2
      automated match to d2ibia1
      complexed with so4, zn
  7. Domain(s) for 2yj2:
  8. Domain(s) for 2yj8:
  9. Domain(s) for 2yj9:
  10. Domain(s) for 2yjb:
  11. Domain(s) for 2yjc:
  12. Domain(s) for 2zfy:
  13. Domain(s) for 3a7s:
  14. Domain(s) for 3bc3:
    1. 1889811Domain d3bc3a_: 3bc3 A: [231838]
      automated match to d2xu3a_
      complexed with opt
    2. 1889812Domain d3bc3b_: 3bc3 B: [231837]
      automated match to d2xu3a_
      complexed with opt
  15. Domain(s) for 3h89:
    1. 1889833Domain d3h89a_: 3h89 A: [232420]
      automated match to d2xu3a_
      complexed with nsx
    2. 1889834Domain d3h89b_: 3h89 B: [232422]
      automated match to d2xu3a_
      complexed with nsx
    3. 1889835Domain d3h89c_: 3h89 C: [232424]
      automated match to d2xu3a_
      complexed with nsx
    4. 1889836Domain d3h89d_: 3h89 D: [232425]
      automated match to d2xu3a_
      complexed with nsx
    5. 1889837Domain d3h89e_: 3h89 E: [232421]
      automated match to d2xu3a_
      complexed with nsx
    6. 1889838Domain d3h89f_: 3h89 F: [232423]
      automated match to d2xu3a_
      complexed with nsx
  16. Domain(s) for 3h8b:
    1. 1889801Domain d3h8ba_: 3h8b A: [232426]
      automated match to d2xu3a_
      complexed with nsy
    2. 1889802Domain d3h8bb_: 3h8b B: [232427]
      automated match to d2xu3a_
      complexed with nsy
    3. 1889803Domain d3h8bc_: 3h8b C: [232429]
      automated match to d2xu3a_
      complexed with nsy
    4. 1889804Domain d3h8bd_: 3h8b D: [232428]
      automated match to d2xu3a_
      complexed with nsy
    5. 1889805Domain d3h8be_: 3h8b E: [232431]
      automated match to d2xu3a_
      complexed with nsy
    6. 1889806Domain d3h8bf_: 3h8b F: [232430]
      automated match to d2xu3a_
      complexed with nsy
  17. Domain(s) for 3h8c:
    1. 1889843Domain d3h8ca_: 3h8c A: [232432]
      automated match to d2xu3a_
      complexed with nsz
    2. 1889844Domain d3h8cb_: 3h8c B: [232433]
      automated match to d2xu3a_
      complexed with nsz
  18. Domain(s) for 3i3t:
    1. 1889819Domain d3i3ta_: 3i3t A: [178066]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    2. 1889820Domain d3i3tc_: 3i3t C: [178068]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    3. 1889821Domain d3i3te_: 3i3t E: [178070]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    4. 1889822Domain d3i3tg_: 3i3t G: [178072]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
  19. Domain(s) for 3iv2:
    1. 1889808Domain d3iv2a_: 3iv2 A: [232636]
      automated match to d2xu4a_
      complexed with gol, na, nag, so4; mutant
    2. 1889809Domain d3iv2b_: 3iv2 B: [232635]
      automated match to d2xu4a_
      complexed with gol, na, nag, so4; mutant
  20. Domain(s) for 3mtn:
    1. 1889831Domain d3mtna_: 3mtn A: [181546]
      Other proteins in same PDB: d3mtnb_, d3mtnd_
      automated match to d2ibia1
      complexed with cl, gol, zn
    2. 1889832Domain d3mtnc_: 3mtn C: [181548]
      Other proteins in same PDB: d3mtnb_, d3mtnd_
      automated match to d2ibia1
      complexed with cl, gol, zn
  21. Domain(s) for 3of8:
  22. Domain(s) for 3of9:
  23. Domain(s) for 3rii:
    1. 1889813Domain d3riia_: 3rii A: [184984]
      automated match to d1ucha_
      complexed with edo, mg
    2. 1889814Domain d3riib_: 3rii B: [184985]
      automated match to d1ucha_
      complexed with edo, mg
  24. Domain(s) for 3ris:
    1. 1889839Domain d3risa_: 3ris A: [184990]
      automated match to d1ucha_
      complexed with gol, so4
    2. 1889840Domain d3risb_: 3ris B: [184991]
      automated match to d1ucha_
      complexed with gol, so4
    3. 1889841Domain d3risc_: 3ris C: [184992]
      automated match to d1ucha_
      complexed with gol, so4
    4. 1889842Domain d3risd_: 3ris D: [184993]
      automated match to d1ucha_
      complexed with gol, so4
  25. Domain(s) for 3tb3:
    1. 1889815Domain d3tb3a_: 3tb3 A: [195998]
      automated match to d3riia_
      complexed with ca
    2. 1889816Domain d3tb3b_: 3tb3 B: [195997]
      automated match to d3riia_
      complexed with ca
  26. Domain(s) for 3von:
    1. 1889845Domain d3vona_: 3von A: [250625]
      Other proteins in same PDB: d3vonb_, d3vonc_, d3vond_, d3vone_, d3vonf_, d3vong_, d3voni_, d3vonj_, d3vonk_, d3vonl_, d3vonm_, d3vonn_, d3vonp_, d3vonq_, d3vonr_, d3vons_, d3vont_, d3vonu_, d3vonw_, d3vonx_, d3vony_, d3vonz_
      automated match to d4i6la_
    2. 1889846Domain d3vonh_: 3von H: [250632]
      Other proteins in same PDB: d3vonb_, d3vonc_, d3vond_, d3vone_, d3vonf_, d3vong_, d3voni_, d3vonj_, d3vonk_, d3vonl_, d3vonm_, d3vonn_, d3vonp_, d3vonq_, d3vonr_, d3vons_, d3vont_, d3vonu_, d3vonw_, d3vonx_, d3vony_, d3vonz_
      automated match to d4i6la_
    3. 1889847Domain d3vono_: 3von O: [250639]
      Other proteins in same PDB: d3vonb_, d3vonc_, d3vond_, d3vone_, d3vonf_, d3vong_, d3voni_, d3vonj_, d3vonk_, d3vonl_, d3vonm_, d3vonn_, d3vonp_, d3vonq_, d3vonr_, d3vons_, d3vont_, d3vonu_, d3vonw_, d3vonx_, d3vony_, d3vonz_
      automated match to d4i6la_
    4. 1889848Domain d3vonv_: 3von V: [250646]
      Other proteins in same PDB: d3vonb_, d3vonc_, d3vond_, d3vone_, d3vonf_, d3vong_, d3voni_, d3vonj_, d3vonk_, d3vonl_, d3vonm_, d3vonn_, d3vonp_, d3vonq_, d3vonr_, d3vons_, d3vont_, d3vonu_, d3vonw_, d3vonx_, d3vony_, d3vonz_
      automated match to d4i6la_
  27. Domain(s) for 4axl:
  28. Domain(s) for 4axm:
    1. 1889823Domain d4axma_: 4axm A: [234106]
      automated match to d2xu3a_
      complexed with gol, v65
    2. 1889824Domain d4axmb_: 4axm B: [234109]
      automated match to d2xu3a_
      complexed with gol, v65
    3. 1889825Domain d4axmf_: 4axm F: [234107]
      automated match to d2xu3a_
      complexed with gol, v65
    4. 1889826Domain d4axmi_: 4axm I: [234110]
      automated match to d2xu3a_
      complexed with gol, v65
    5. 1889827Domain d4axml_: 4axm L: [234108]
      automated match to d2xu3a_
      complexed with gol, v65
    6. 1889828Domain d4axmo_: 4axm O: [234111]
      automated match to d2xu3a_
      complexed with gol, v65
  29. Domain(s) for 4i6l:
  30. Domain(s) for 4leg:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.0 automated matches: