Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1398964Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 1398965Superfamily d.3.1: Cysteine proteinases [54001] (23 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 1399697Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 1399698Protein automated matches [190230] (14 species)
    not a true protein
  7. 1399710Species Human (Homo sapiens) [TaxId:9606] [187072] (29 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2etl:
  2. Domain(s) for 2nqd:
  3. Domain(s) for 2xu3:
  4. Domain(s) for 2xu4:
  5. Domain(s) for 2xu5:
  6. Domain(s) for 2y5b:
    1. 1399759Domain d2y5ba_: 2y5b A: [170606]
      automated match to d2ibia1
      complexed with so4, zn
    2. 1399760Domain d2y5be_: 2y5b E: [170607]
      automated match to d2ibia1
      complexed with so4, zn
  7. Domain(s) for 2yj2:
  8. Domain(s) for 2yj8:
  9. Domain(s) for 2yj9:
  10. Domain(s) for 2yjb:
  11. Domain(s) for 2yjc:
  12. Domain(s) for 2zfy:
  13. Domain(s) for 3a7s:
  14. Domain(s) for 3bc3:
    1. 1399729Domain d3bc3a_: 3bc3 A: [231838]
      automated match to d2xu3a_
      complexed with opt
    2. 1399730Domain d3bc3b_: 3bc3 B: [231837]
      automated match to d2xu3a_
      complexed with opt
  15. Domain(s) for 3h89:
    1. 1399747Domain d3h89a_: 3h89 A: [232420]
      automated match to d2xu3a_
      complexed with nsx
    2. 1399748Domain d3h89b_: 3h89 B: [232422]
      automated match to d2xu3a_
      complexed with nsx
    3. 1399749Domain d3h89c_: 3h89 C: [232424]
      automated match to d2xu3a_
      complexed with nsx
    4. 1399750Domain d3h89d_: 3h89 D: [232425]
      automated match to d2xu3a_
      complexed with nsx
    5. 1399751Domain d3h89e_: 3h89 E: [232421]
      automated match to d2xu3a_
      complexed with nsx
    6. 1399752Domain d3h89f_: 3h89 F: [232423]
      automated match to d2xu3a_
      complexed with nsx
  16. Domain(s) for 3h8b:
    1. 1399723Domain d3h8ba_: 3h8b A: [232426]
      automated match to d2xu3a_
      complexed with nsy
    2. 1399724Domain d3h8bb_: 3h8b B: [232427]
      automated match to d2xu3a_
    3. 1399725Domain d3h8bc_: 3h8b C: [232429]
      automated match to d2xu3a_
      complexed with nsy
    4. 1399726Domain d3h8bd_: 3h8b D: [232428]
      automated match to d2xu3a_
    5. 1399727Domain d3h8be_: 3h8b E: [232431]
      automated match to d2xu3a_
    6. 1399728Domain d3h8bf_: 3h8b F: [232430]
      automated match to d2xu3a_
      complexed with nsy
  17. Domain(s) for 3h8c:
    1. 1399745Domain d3h8ca_: 3h8c A: [232432]
      automated match to d2xu3a_
      complexed with nsz
    2. 1399746Domain d3h8cb_: 3h8c B: [232433]
      automated match to d2xu3a_
  18. Domain(s) for 3i3t:
    1. 1399741Domain d3i3ta_: 3i3t A: [178066]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    2. 1399742Domain d3i3tc_: 3i3t C: [178068]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    3. 1399743Domain d3i3te_: 3i3t E: [178070]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
    4. 1399744Domain d3i3tg_: 3i3t G: [178072]
      Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_
      automated match to d2ibia1
      complexed with neh, zn
  19. Domain(s) for 3iv2:
    1. 1399732Domain d3iv2a_: 3iv2 A: [232636]
      automated match to d2xu4a_
      complexed with gol, na, nag, so4; mutant
    2. 1399733Domain d3iv2b_: 3iv2 B: [232635]
      automated match to d2xu4a_
      complexed with gol, na, nag, so4; mutant
  20. Domain(s) for 3mtn:
    1. 1399761Domain d3mtna_: 3mtn A: [181546]
      Other proteins in same PDB: d3mtnb_, d3mtnd_
      automated match to d2ibia1
      complexed with cl, gol, zn
    2. 1399762Domain d3mtnc_: 3mtn C: [181548]
      Other proteins in same PDB: d3mtnb_, d3mtnd_
      automated match to d2ibia1
      complexed with cl, gol, zn
  21. Domain(s) for 3of8:
  22. Domain(s) for 3of9:
  23. Domain(s) for 3rii:
    1. 1399735Domain d3riia_: 3rii A: [184984]
      automated match to d1ucha_
      complexed with edo, mg
    2. 1399736Domain d3riib_: 3rii B: [184985]
      automated match to d1ucha_
      complexed with edo, mg
  24. Domain(s) for 3ris:
    1. 1399763Domain d3risa_: 3ris A: [184990]
      automated match to d1ucha_
      complexed with gol, so4
    2. 1399764Domain d3risb_: 3ris B: [184991]
      automated match to d1ucha_
      complexed with gol, so4
    3. 1399765Domain d3risc_: 3ris C: [184992]
      automated match to d1ucha_
      complexed with gol, so4
    4. 1399766Domain d3risd_: 3ris D: [184993]
      automated match to d1ucha_
      complexed with gol, so4
  25. Domain(s) for 3tb3:
    1. 1399737Domain d3tb3a_: 3tb3 A: [195998]
      automated match to d3riia_
      complexed with ca
    2. 1399738Domain d3tb3b_: 3tb3 B: [195997]
      automated match to d3riia_
      complexed with ca
  26. Domain(s) for 4axl:
  27. Domain(s) for 4axm:
    1. 1399753Domain d4axma_: 4axm A: [234106]
      automated match to d2xu3a_
      complexed with gol, v65
    2. 1399754Domain d4axmb_: 4axm B: [234109]
      automated match to d2xu3a_
      complexed with gol, v65
    3. 1399755Domain d4axmf_: 4axm F: [234107]
      automated match to d2xu3a_
      complexed with gol, v65
    4. 1399756Domain d4axmi_: 4axm I: [234110]
      automated match to d2xu3a_
      complexed with gol, v65
    5. 1399757Domain d4axml_: 4axm L: [234108]
      automated match to d2xu3a_
      complexed with gol, v65
    6. 1399758Domain d4axmo_: 4axm O: [234111]
      automated match to d2xu3a_
      complexed with gol, v65
  28. Domain(s) for 4i6l:
  29. Domain(s) for 4leg:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.3.1.0 automated matches: