Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (4 families) (S)
    two constituent families are related by circular permutation
  5. Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 proteins)
    topologically similar to the C-terminal domain of PapD
  6. Protein automated matches [190234] (2 species)
    not a true protein
  7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [186999] (6 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 2bwq:
  2. Domain(s) for 2cm5:
  3. Domain(s) for 2cm6:
    1. Domain d2cm6a_: 2cm6 A: [130614]
      automated match to d3rpba_
      complexed with ca, po4
    2. Domain d2cm6b_: 2cm6 B: [130615]
      automated match to d3rpba_
      complexed with ca, po4
  4. Domain(s) for 2yoa:
    1. Domain d2yoaa1: 2yoa A:271-418 [197125]
      Other proteins in same PDB: d2yoaa2
      automated match to d1uova_
      complexed with ca, scn, sep
    2. Domain d2yoab_: 2yoa B: [197129]
      Other proteins in same PDB: d2yoaa2
      automated match to d1uova_
      complexed with ca, scn, sep
  5. Domain(s) for 5lo8:
    1. Domain d5lo8a_: 5lo8 A: [335623]
      automated match to d3rpba_
      complexed with ca, gol, pio, so4
    2. Domain d5lo8b_: 5lo8 B: [335747]
      automated match to d3rpba_
      complexed with ca, gol, pio, so4
  6. Domain(s) for 5low:
    1. Domain d5lowa_: 5low A: [335705]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol
    2. Domain d5lowb_: 5low B: [335811]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol
    3. Domain d5lowc_: 5low C: [335731]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol
    4. Domain d5lowh_: 5low H: [335704]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol
    5. Domain d5lowi_: 5low I: [335637]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol
    6. Domain d5lowj_: 5low J: [335630]
      Other proteins in same PDB: d5lowd1, d5lowd2, d5lowe_, d5lowf_, d5lowg1, d5lowg2, d5lowk1, d5lowk2, d5lowl_, d5lowm_, d5lown1, d5lown2
      automated match to d3rpba_
      complexed with ca, gol

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.7.1.2 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.7.1.2 automated matches: