Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983660Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 1983661Protein automated matches [190154] (68 species)
    not a true protein
  7. 1983803Species Human (Homo sapiens) [TaxId:9606] [186924] (16 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2a07:
    1. 1983806Domain d2a07g_: 2a07 G: [125939]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    2. 1983807Domain d2a07h_: 2a07 H: [125940]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    3. 1983808Domain d2a07i_: 2a07 I: [125941]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    4. 1983809Domain d2a07j_: 2a07 J: [125942]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    5. 1983810Domain d2a07k_: 2a07 K: [125943]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
  2. Domain(s) for 2as5:
    1. 1983818Domain d2as5f_: 2as5 F: [127235]
      Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    2. 1983819Domain d2as5g_: 2as5 G: [127236]
      Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
  3. Domain(s) for 2dao:
  4. Domain(s) for 2dll:
  5. Domain(s) for 2lnb:
  6. Domain(s) for 2zme:
    1. 1983820Domain d2zmea1: 2zme A:34-175 [207872]
      automated match to d1u5ta1
    2. 1983821Domain d2zmea2: 2zme A:176-250 [207873]
      automated match to d1u5ta2
  7. Domain(s) for 3cuq:
    1. 1983816Domain d3cuqa1: 3cuq A:34-175 [208955]
      automated match to d1u5ta1
    2. 1983817Domain d3cuqa2: 3cuq A:176-252 [208956]
      automated match to d1u5ta2
  8. Domain(s) for 4avp:
    1. 1983812Domain d4avpa_: 4avp A: [219164]
      automated match to d1duxc_
      complexed with edo
    2. 1983813Domain d4avpb_: 4avp B: [219165]
      automated match to d1duxc_
      complexed with edo
    3. 1983814Domain d4avpc_: 4avp C: [219166]
      automated match to d1duxc_
      complexed with edo
    4. 1983815Domain d4avpd_: 4avp D: [219167]
      automated match to d1duxc_
      complexed with edo
  9. Domain(s) for 4co8:
  10. Domain(s) for 4irg:
  11. Domain(s) for 4irh:
  12. Domain(s) for 5hdk:
    1. 2284608Domain d5hdkd1: 5hdk D:7-111 [327909]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    2. 2284627Domain d5hdkb1: 5hdk B:7-110 [327928]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    3. 2284741Domain d5hdkc1: 5hdk C:7-110 [328042]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    4. 2284902Domain d5hdka1: 5hdk A:7-110 [328203]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
  13. Domain(s) for 5ils:
  14. Domain(s) for 5ilu:
  15. Domain(s) for 5ilv:
  16. Domain(s) for 5ocn:
    1. 2293911Domain d5ocnh_: 5ocn H: [337212]
      automated match to d2d2wa_
      complexed with k
    2. 2293912Domain d5ocng_: 5ocn G: [337213]
      automated match to d2d2wa_
      complexed with k
    3. 2293915Domain d5ocnb_: 5ocn B: [337216]
      automated match to d2d2wa_
      complexed with k
    4. 2293917Domain d5ocnd_: 5ocn D: [337218]
      automated match to d2d2wa_
      complexed with k
    5. 2293918Domain d5ocne_: 5ocn E: [337219]
      automated match to d2d2wa_
      complexed with k
    6. 2293926Domain d5ocnc_: 5ocn C: [337227]
      automated match to d2d2wa_
      complexed with k
    7. 2293931Domain d5ocnf_: 5ocn F: [337232]
      automated match to d2d2wa_
      complexed with k
    8. 2293936Domain d5ocna_: 5ocn A: [337237]
      automated match to d2d2wa_
      complexed with k

More info for Species Human (Homo sapiens) [TaxId:9606] from a.4.5.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.4.5.0 automated matches: