Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2691777Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2692959Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2694554Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 2694555Protein automated matches [190154] (92 species)
    not a true protein
  7. 2694784Species Human (Homo sapiens) [TaxId:9606] [186924] (29 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2a07:
    1. 2694798Domain d2a07g_: 2a07 G: [125939]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    2. 2694799Domain d2a07h_: 2a07 H: [125940]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    3. 2694800Domain d2a07i_: 2a07 I: [125941]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    4. 2694801Domain d2a07j_: 2a07 J: [125942]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    5. 2694802Domain d2a07k_: 2a07 K: [125943]
      Other proteins in same PDB: d2a07f1
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
  2. Domain(s) for 2as5:
    1. 2694823Domain d2as5f_: 2as5 F: [127235]
      Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
    2. 2694824Domain d2as5g_: 2as5 G: [127236]
      Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
      automated match to d1d5va_
      protein/DNA complex; complexed with mg
  3. Domain(s) for 2dao:
  4. Domain(s) for 2dll:
  5. Domain(s) for 2lnb:
  6. Domain(s) for 2lso:
  7. Domain(s) for 2rqp:
  8. Domain(s) for 2zme:
    1. 2694826Domain d2zmea1: 2zme A:34-175 [207872]
      automated match to d1u5ta1
    2. 2694827Domain d2zmea2: 2zme A:176-250 [207873]
      automated match to d1u5ta2
  9. Domain(s) for 3cuq:
    1. 2694813Domain d3cuqa1: 3cuq A:34-175 [208955]
      automated match to d1u5ta1
    2. 2694814Domain d3cuqa2: 3cuq A:176-252 [208956]
      automated match to d1u5ta2
  10. Domain(s) for 4avp:
    1. 2694808Domain d4avpa_: 4avp A: [219164]
      automated match to d1duxc_
      complexed with edo
    2. 2694809Domain d4avpb_: 4avp B: [219165]
      automated match to d1duxc_
      complexed with edo
    3. 2694810Domain d4avpc_: 4avp C: [219166]
      automated match to d1duxc_
      complexed with edo
    4. 2694811Domain d4avpd_: 4avp D: [219167]
      automated match to d1duxc_
      complexed with edo
  11. Domain(s) for 4co8:
  12. Domain(s) for 4irg:
  13. Domain(s) for 4irh:
  14. Domain(s) for 5hdk:
    1. 2694787Domain d5hdka1: 5hdk A:7-110 [328203]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    2. 2694788Domain d5hdkb1: 5hdk B:7-110 [327928]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    3. 2694789Domain d5hdkc1: 5hdk C:7-110 [328042]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
    4. 2694790Domain d5hdkd1: 5hdk D:7-111 [327909]
      Other proteins in same PDB: d5hdka2, d5hdkb2, d5hdkc2, d5hdkd2
      automated match to d1hksa_
      complexed with cl, k, na
  15. Domain(s) for 5ils:
  16. Domain(s) for 5ilu:
  17. Domain(s) for 5ilv:
  18. Domain(s) for 5ocn:
    1. 2694828Domain d5ocna_: 5ocn A: [337237]
      automated match to d2d2wa_
      complexed with k
    2. 2694829Domain d5ocnb_: 5ocn B: [337216]
      automated match to d2d2wa_
      complexed with k
    3. 2694830Domain d5ocnc_: 5ocn C: [337227]
      automated match to d2d2wa_
      complexed with k
    4. 2694831Domain d5ocnd_: 5ocn D: [337218]
      automated match to d2d2wa_
      complexed with k
    5. 2694832Domain d5ocne_: 5ocn E: [337219]
      automated match to d2d2wa_
      complexed with k
    6. 2694833Domain d5ocnf_: 5ocn F: [337232]
      automated match to d2d2wa_
      complexed with k
    7. 2694834Domain d5ocng_: 5ocn G: [337213]
      automated match to d2d2wa_
      complexed with k
    8. 2694835Domain d5ocnh_: 5ocn H: [337212]
      automated match to d2d2wa_
      complexed with k
  19. Domain(s) for 6j6w:
    1. 2694804Domain d6j6wa_: 6j6w A: [379216]
      automated match to d1hksa_
      complexed with na, no3; mutant
    2. 2694805Domain d6j6wb_: 6j6w B: [379207]
      automated match to d1hksa_
      complexed with na, no3; mutant
  20. Domain(s) for 6l9z:
  21. Domain(s) for 6lbi:
    1. 2694817Domain d6lbic_: 6lbi C: [399521]
      automated match to d2mbfa_
      protein/DNA complex
    2. 2694818Domain d6lbid_: 6lbi D: [399615]
      automated match to d2mbfa_
      protein/DNA complex
    3. 2694819Domain d6lbig_: 6lbi G: [399515]
      automated match to d2mbfa_
      protein/DNA complex
    4. 2694820Domain d6lbih_: 6lbi H: [399510]
      automated match to d2mbfa_
      protein/DNA complex
    5. 2694821Domain d6lbik_: 6lbi K: [399687]
      automated match to d2mbfa_
      protein/DNA complex
    6. 2694822Domain d6lbil_: 6lbi L: [399516]
      automated match to d2mbfa_
      protein/DNA complex
  22. Domain(s) for 6qvw:
  23. Domain(s) for 6td4:
  24. Domain(s) for 6xat:
  25. Domain(s) for 7dci:
  26. Domain(s) for 7dcu:
    1. 2694794Domain d7dcua1: 7dcu A:7-112 [417970]
      Other proteins in same PDB: d7dcua2
      automated match to d1hksa_
      protein/DNA complex; complexed with na
    2. 2694795Domain d7dcub_: 7dcu B: [417972]
      Other proteins in same PDB: d7dcua2
      automated match to d1hksa_
      protein/DNA complex; complexed with na
    3. 2694796Domain d7dcuc_: 7dcu C: [417973]
      Other proteins in same PDB: d7dcua2
      automated match to d1hksa_
      protein/DNA complex; complexed with na
  27. Domain(s) for 7k5y:
  28. Domain(s) for 7k60:
  29. Domain(s) for 7k63:

More info for Species Human (Homo sapiens) [TaxId:9606] from a.4.5.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.4.5.0 automated matches: