Lineage for Species: Jellyfish (Aequorea victoria) [TaxId: 6100]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2319424Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 2319425Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 2319893Family a.39.1.5: Calmodulin-like [47502] (24 protein domains)
    Duplication: made with two pairs of EF-hands
  6. 2320473Protein automated matches [190064] (22 species)
    not a true protein
  7. 2320541Species Jellyfish (Aequorea victoria) [TaxId:6100] [186782] (5 PDB entries)

PDB entries in Species: Jellyfish (Aequorea victoria) [TaxId: 6100]:

  1. Domain(s) for 1uhh:
    1. 2320544Domain d1uhha2: 1uhh A:2-189 [119675]
      Other proteins in same PDB: d1uhha3
      automated match to d1ej3a_
      complexed with czp
    2. 2320545Domain d1uhhb_: 1uhh B: [119676]
      Other proteins in same PDB: d1uhha3
      automated match to d1ej3a_
      complexed with czp
  2. Domain(s) for 1uhi:
    1. 2320548Domain d1uhia2: 1uhi A:2-189 [119677]
      Other proteins in same PDB: d1uhia3
      automated match to d1ej3a_
      complexed with czi
    2. 2320549Domain d1uhib_: 1uhi B: [119678]
      Other proteins in same PDB: d1uhia3
      automated match to d1ej3a_
      complexed with czi
  3. Domain(s) for 1uhj:
    1. 2320546Domain d1uhja_: 1uhj A: [119679]
      Other proteins in same PDB: d1uhjb3
      automated match to d1ej3a_
      complexed with czb
    2. 2320547Domain d1uhjb2: 1uhj B:2-189 [119680]
      Other proteins in same PDB: d1uhjb3
      automated match to d1ej3a_
      complexed with czb
  4. Domain(s) for 1uhk:
    1. 2320542Domain d1uhka2: 1uhk A:2-189 [119681]
      Other proteins in same PDB: d1uhka3, d1uhkb3
      automated match to d1ej3a_
      complexed with czn
    2. 2320543Domain d1uhkb2: 1uhk B:2-189 [119682]
      Other proteins in same PDB: d1uhka3, d1uhkb3
      automated match to d1ej3a_
      complexed with czn
  5. Domain(s) for 5zab:
    1. 3053244Domain d5zaba1: 5zab A:1-189 [353306]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    2. 3053251Domain d5zabe1: 5zab E:1-189 [353313]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    3. 3053253Domain d5zabj1: 5zab J:1-189 [353315]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    4. 3053256Domain d5zabp_: 5zab P: [353318]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    5. 3053257Domain d5zabm1: 5zab M:1-189 [353319]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    6. 3053260Domain d5zabf1: 5zab F:1-189 [353322]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    7. 3053275Domain d5zabd1: 5zab D:1-189 [353337]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    8. 3053318Domain d5zabi1: 5zab I:1-189 [353380]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    9. 3053323Domain d5zabg1: 5zab G:1-189 [353385]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    10. 3053327Domain d5zabl_: 5zab L: [353389]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    11. 3053336Domain d5zabh1: 5zab H:1-189 [353398]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    12. 3053339Domain d5zabn1: 5zab N:1-189 [353401]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    13. 3053342Domain d5zabc1: 5zab C:1-189 [353404]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    14. 3053344Domain d5zabb1: 5zab B:1-189 [353406]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    15. 3053346Domain d5zabk1: 5zab K:1-189 [353408]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3
    16. 3053348Domain d5zabo1: 5zab O:1-189 [353410]
      Other proteins in same PDB: d5zaba2, d5zabb2, d5zabc2, d5zabd2, d5zabe2, d5zabf2, d5zabg2, d5zabh2, d5zabi2, d5zabj2, d5zabk2, d5zabm2, d5zabn2, d5zabo2
      automated match to d4nqga_
      complexed with 9a3

More info for Species Jellyfish (Aequorea victoria) [TaxId:6100] from a.39.1.5 automated matches

Timeline for Species Jellyfish (Aequorea victoria) [TaxId:6100] from a.39.1.5 automated matches: