Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2056344Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. 2056345Superfamily b.36.1: PDZ domain-like [50156] (7 families) (S)
    peptide-binding domain
  5. 2056346Family b.36.1.1: PDZ domain [50157] (47 proteins)
    Pfam PF00595
  6. 2056646Protein automated matches [190055] (7 species)
    not a true protein
  7. 2056746Species Norway rat (Rattus norvegicus) [TaxId:10116] [186775] (11 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1tp5:
  2. Domain(s) for 2awu:
    1. 2056760Domain d2awua_: 2awu A: [162931]
      automated match to d1qlca_
    2. 2056761Domain d2awub_: 2awu B: [162932]
      automated match to d1qlca_
  3. Domain(s) for 2aww:
    1. 2056762Domain d2awwa_: 2aww A: [162933]
      automated match to d1qlca_
    2. 2056763Domain d2awwb_: 2aww B: [162934]
      automated match to d1qlca_
  4. Domain(s) for 2awx:
    1. 2056750Domain d2awxa_: 2awx A: [162935]
      automated match to d1qlca_
      complexed with his
    2. 2056751Domain d2awxb_: 2awx B: [162936]
      automated match to d1qlca_
      complexed with his
  5. Domain(s) for 2fn5:
  6. Domain(s) for 2g2l:
    1. 2056764Domain d2g2la_: 2g2l A: [164562]
      automated match to d1qlca_
    2. 2056765Domain d2g2lb_: 2g2l B: [164563]
      automated match to d1qlca_
  7. Domain(s) for 2i0l:
    1. 2056766Domain d2i0la_: 2i0l A: [165356]
      automated match to d1qlca_
    2. 2056767Domain d2i0lb_: 2i0l B: [165357]
      automated match to d1qlca_
  8. Domain(s) for 3gsl:
    1. 2056756Domain d3gsla1: 3gsl A:61-153 [246353]
      Other proteins in same PDB: d3gsla3
      automated match to d4h11a_
    2. 2056757Domain d3gsla2: 3gsl A:154-253 [246354]
      Other proteins in same PDB: d3gsla3
      automated match to d4h11a_
    3. 2056758Domain d3gslb1: 3gsl B:61-153 [246355]
      Other proteins in same PDB: d3gsla3
      automated match to d4h11a_
    4. 2056759Domain d3gslb2: 3gsl B:154-253 [246356]
      Other proteins in same PDB: d3gsla3
      automated match to d4h11a_
  9. Domain(s) for 4h11:
    1. 2056748Domain d4h11a1: 4h11 A:93-188 [202347]
      Other proteins in same PDB: d4h11a2, d4h11a3, d4h11b2, d4h11b3
      automated match to d4h11b_
      complexed with act, so4
    2. 2056749Domain d4h11b1: 4h11 B:93-188 [196742]
      Other proteins in same PDB: d4h11a2, d4h11a3, d4h11b2, d4h11b3
      automated match to d2wl7a_
      complexed with act, so4
  10. Domain(s) for 5mz7:
    1. 2056752Domain d5mz7a_: 5mz7 A: [339798]
      automated match to d3i4wa_
    2. 2056753Domain d5mz7b_: 5mz7 B: [339794]
      automated match to d3i4wa_
    3. 2056754Domain d5mz7c_: 5mz7 C: [339801]
      automated match to d3i4wa_
    4. 2056755Domain d5mz7d_: 5mz7 D: [339796]
      automated match to d3i4wa_
  11. Domain(s) for 5w72:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.36.1.1 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.36.1.1 automated matches: