Lineage for d3ud6a_ (3ud6 A:)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 968086Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 968402Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families) (S)
  5. 968791Family c.1.2.4: Tryptophan biosynthesis enzymes [51381] (4 proteins)
  6. 968899Protein automated matches [190053] (7 species)
    not a true protein
  7. 968900Species Artificial gene [TaxId:32630] [188991] (4 PDB entries)
  8. 968901Domain d3ud6a_: 3ud6 A: [186232]
    automated match to d1a53a_
    complexed with ll8, so4

Details for d3ud6a_

PDB Entry: 3ud6 (more details), 2.09 Å

PDB Description: Structural analyses of covalent enzyme-substrate analogue complexes reveal strengths and limitations of de novo enzyme design
PDB Compounds: (A:) Retro-Aldolase

SCOPe Domain Sequences for d3ud6a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ud6a_ c.1.2.4 (A:) automated matches {Artificial gene [TaxId: 32630]}
prylkgwledvvqlslrrpsvrasrqrpiislnerilefnkrnitaiiatymrkspwgld
verdpieyakfmeryavglsicteekyangsyetlrkiassvsipilmadfivkesqidd
aynlgadtvplivkiltereleslleyarsygmepiikindendldialrigarfigics
rdwetleinkenqrklismipsnvvkvastgiserneieelrklgvnafsiisslmrnpe
kikelieg

SCOPe Domain Coordinates for d3ud6a_:

Click to download the PDB-style file with coordinates for d3ud6a_.
(The format of our PDB-style files is described here.)

Timeline for d3ud6a_: