Lineage for d3ubnk_ (3ubn K:)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 942760Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 942761Superfamily b.19.1: Viral protein domain [49818] (3 families) (S)
    forms homotrimers
  5. 942806Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)
  6. 942807Protein Hemagglutinin [49824] (5 species)
    includes rudiment esterase domain
  7. 942813Species Influenza A virus, different strains [TaxId:11320] [49825] (54 PDB entries)
  8. 942859Domain d3ubnk_: 3ubn K: [186215]
    automated match to d1ruyh_
    complexed with nag

Details for d3ubnk_

PDB Entry: 3ubn (more details), 2.51 Å

PDB Description: influenza hemagglutinin from the 2009 pandemic in complex with ligand 6sln
PDB Compounds: (K:) hemagglutinin HA1

SCOPe Domain Sequences for d3ubnk_:

Sequence, based on SEQRES records: (download)

>d3ubnk_ b.19.1.2 (K:) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
pgdtlcigyhannstdtvdtvleknvtvthsvnlledkhngklcklrgvaplhlgkcnia
gwilgnpeceslstasswsyivetpssdngtcypgdfidyeelreqlssvssferfeifp
ktsswpnhdsnkgvtaacphagaksfyknliwlvkkgnsypklsksyindkgkevlvlwg
ihhpstsadqqslyqnadtyvfvcssryskkfkpeiaicpkvrdqegrmnyywtlvepgd
kitfeatgnlvvpryafamernagsgiiisdtpvhdcnttcqtpkgaintslpfqnihpi
tigkcpkyvkstklrlatglrnips

Sequence, based on observed residues (ATOM records): (download)

>d3ubnk_ b.19.1.2 (K:) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
pgdtlcigyhannstdtvdtvleknvtvthsvnlledkhngklcklrgvaplhlgkcnia
gwilgnpecsswsyivetpssdngtcypgdfidyeelreqlssvssferfeifpktsswp
nhdsnkgvtaacphagaksfyknliwlvkkgnsypklsksyindkgkevlvlwgihhpst
sadqqslyqnadtyvfvcssryskkfkpeiaicpkvrdqegrmnyywtlvepgdkitfea
tgnlvvpryafamernagsgiiisdtpvhdcnttcqtpkgaintslpfqnihpitigkcp
kyvkstklrlatglrnips

SCOPe Domain Coordinates for d3ubnk_:

Click to download the PDB-style file with coordinates for d3ubnk_.
(The format of our PDB-style files is described here.)

Timeline for d3ubnk_: