Lineage for d3u6ac1 (3u6a C:-3-385)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2060177Family b.50.1.2: Pepsin-like [50646] (11 protein domains)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 2060235Protein beta-secretase (memapsin) [50671] (1 species)
  7. 2060236Species Human (Homo sapiens) [TaxId:9606] [50672] (281 PDB entries)
    Uniprot P56817 58-446 ! Uniprot P56817 60-447
  8. 2060478Domain d3u6ac1: 3u6a C:-3-385 [186095]
    Other proteins in same PDB: d3u6ac2
    automated match to d1fkna_
    complexed with 18p, so4

Details for d3u6ac1

PDB Entry: 3u6a (more details), 2.2 Å

PDB Description: Rational Design and Synthesis of Aminopiperazinones as Beta Secretase (BACE) Inhibitors
PDB Compounds: (C:) Beta-secretase 1

SCOPe Domain Sequences for d3u6ac1:

Sequence, based on SEQRES records: (download)

>d3u6ac1 b.50.1.2 (C:-3-385) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
gsfvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqrql
sstyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsnwe
gilglayaeiarpddslepffdslvkqthvpnlfslqlcgagfplnqsevlasvggsmii
ggidhslytgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnlrl
pkkvfeaavksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnqsf
ritilpqqylrpvedvatsqddcykfaisqsstgtvmgavimegfyvvfdrarkrigfav
sachvhdefrtaavegpfvtldmedcgyn

Sequence, based on observed residues (ATOM records): (download)

>d3u6ac1 b.50.1.2 (C:-3-385) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
gsfvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqrql
sstyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsnwe
gilglayaeiarpddslepffdslvkqthvpnlfslqlcgagfplasvggsmiiggidhs
lytgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnlrlpkkvfe
aavksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnqsfritilp
qqylrpvedvatsqddcykfaisqsstgtvmgavimegfyvvfdrarkrigfavsachvh
defrtaavegpfvtldmedcgyn

SCOPe Domain Coordinates for d3u6ac1:

Click to download the PDB-style file with coordinates for d3u6ac1.
(The format of our PDB-style files is described here.)

Timeline for d3u6ac1:

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Domains from same chain:
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d3u6ac2