SCOPe 2.07: Domain d3u5kb1: 3u5k B:44-166

Lineage for d3u5kb1 (3u5k B:44-166)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.2: Bromodomain [47370] (2 families)

5. Family a.29.2.0: automated matches [191428] (1 protein)
   not a true family

6. Protein automated matches [190615] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187641] (1004 PDB entries)

8. Domain d3u5kb1: 3u5k B:44-166 [186084]
   Other proteins in same PDB: d3u5kb2, d3u5kc2
   automated match to d1jm4b_
   complexed with 08j

Details for d3u5kb1

PDB Entry: 3u5k, 1.8 Å

PDB Description: Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam

PDB Compounds: (B:) Bromodomain-containing protein 4

SCOPe Domain Sequences for d3u5kb1:

Sequence; same for both SEQRES and ATOM records:

>d3u5kb1 a.29.2.0 (B:44-166) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nppppetsnpnkpkrqtnqlqyllrvvlktlwkhqfawpfqqpvdavklnlpdyykiikt
pmdmgtikkrlennyywnaqeciqdfntmftncyiynkpgddivlmaealeklflqkine
lpt

Timeline for d3u5kb1:

• d3u5kb1 first appeared in SCOPe 2.01, called d3u5kb_
  
• d3u5kb1 appears in SCOPe 2.06
  
• d3u5kb1 appears in the current release, SCOPe 2.08