SCOPe 2.08: Domain d3sffa_: 3sff A:

Lineage for d3sffa_ (3sff A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.2: Histone deacetylase, HDAC [52773] (4 proteins)
   automatically mapped to Pfam PF00850

6. Protein automated matches [190786] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188039] (41 PDB entries)

8. Domain d3sffa_: 3sff A: [185366]
   automated match to d1t64a_
   complexed with 0di, k, zn

Details for d3sffa_

PDB Entry: 3sff, 2 Å

PDB Description: Crystal Structure of Human HDAC8 Inhibitor Complex, an Amino Acid Derived Inhibitor

PDB Compounds: (A:) Histone deacetylase 8

SCOPe Domain Sequences for d3sffa_:

Sequence, based on SEQRES records:

>d3sffa_ c.42.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsqegdddhpdsieyglgydcpategifdyaaaiggatitaaqclidgmckv
ainwsggwhhakkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsfts
kvmtvslhkfspgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyq
afnpkavvlqlgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlantar
cwtyltgvilgktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnl
khvv

Sequence, based on observed residues (ATOM records):

>d3sffa_ c.42.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsgifdyaaaiggatitaaqclidgmckvainwsggwhhakkdeasgfcyln
davlgilrlrrkferilyvdldlhhgdgvedafsftskvmtvslhkfspgffpgtgdvsd
vglgkgryysvnvpiqdgiqdekyyqicesvlkevyqafnpkavvlqlgadtiagdpmcs
fnmtpvgigkclkyilqwqlatlilggggynlantarcwtyltgvilgktlsseipdhef
ftaygpdyvleitpscrpdrnephriqqilnyikgnlkhvv

Timeline for d3sffa_:

• d3sffa_ first appeared in SCOPe 2.01
  
• d3sffa_ appears in SCOPe 2.07