SCOPe 2.08: Domain d3sbta1: 3sbt A:1836-2086

Lineage for d3sbta1 (3sbt A:1836-2086)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (18 families)
   consists of one domain of this fold

5. Family c.55.3.14: Prp8 beta-finger domain-like [159638] (1 protein)
   automatically mapped to Pfam PF12134

6. Protein Pre-mRNA splicing factor 8, Prp8 / Spp42 [159639] (4 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [234880] (138 PDB entries)

8. Domain d3sbta1: 3sbt A:1836-2086 [185351]
   Other proteins in same PDB: d3sbta2, d3sbtb1, d3sbtb2
   automated match to d3e9oa1
   complexed with pgo, so4

Details for d3sbta1

PDB Entry: 3sbt, 1.8 Å

PDB Description: Crystal structure of a Aar2-Prp8 complex

PDB Compounds: (A:) Pre-mRNA-splicing factor 8

SCOPe Domain Sequences for d3sbta1:

Sequence; same for both SEQRES and ATOM records:

>d3sbta1 c.55.3.14 (A:1836-2086) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
nssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflkiih
tsvwagqkrlsqlakwktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfpnia
irptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlllral
ktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnisalt
qteikdiilgq

Timeline for d3sbta1:

• d3sbta1 first appeared in SCOPe 2.01, called d3sbta_
  
• d3sbta1 appears in SCOPe 2.07