SCOPe 2.08: Domain d3s3rb_: 3s3r B:

Lineage for d3s3rb_ (3s3r B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.0: automated matches [191342] (1 protein)
   not a true family

6. Protein automated matches [190230] (23 species)
   not a true protein

7. Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [189710] (7 PDB entries)

8. Domain d3s3rb_: 3s3r B: [185258]
   automated match to d1qdqa_
   complexed with 0iw

Details for d3s3rb_

PDB Entry: 3s3r, 2.64 Å

PDB Description: Structure of cathepsin B1 from Schistosoma mansoni in complex with K11777 inhibitor

PDB Compounds: (B:) Cathepsin B-like peptidase (C01 family)

SCOPe Domain Sequences for d3s3rb_:

Sequence, based on SEQRES records:

>d3s3rb_ d.3.1.0 (B:) automated matches {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}
veipssfdsrkkwprcksiatirdqsrcgscwafgaveamsdrsciqsggkqnvelsavd
llsccescglgceggilgpawdywvkegivtgsskenhagcepypfpkcehhtkgkyppc
gskiyktprckqtcqkkyktpytqdkhrgkssynvkndekaiqkeimkygpveagftvye
dflnyksgiykhitgetlgghairiigwgvenkapywlianswnedwgengyfrivrgrd
ecsiesevtagrin

Sequence, based on observed residues (ATOM records):

>d3s3rb_ d.3.1.0 (B:) automated matches {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}
veipssfdsrkkwprcksiatirdqsrcgscwafgaveamsdrsciqsvelsavdllscc
escglgceggilgpawdywvkegivtgsskenhagcepypfpkcehhtkgkyppcgskiy
ktprckqtcqkkyktpytqdkhrgkssynvkndekaiqkeimkygpveagftvyedflny
ksgiykhitgetlgghairiigwgvenkapywlianswnedwgengyfrivrgrdecsie
sevtagrin

Timeline for d3s3rb_:

• d3s3rb_ first appeared in SCOPe 2.01
  
• d3s3rb_ appears in SCOPe 2.07