SCOPe 2.01: Domain d3ryea_: 3rye A:

Lineage for d3ryea_ (3rye A:)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (5 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)

6. Protein automated matches [190489] (4 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187688] (20 PDB entries)

8. Domain d3ryea_: 3rye A: [185204]
   automated match to d1fpsa_
   complexed with mg, so4, unr

Details for d3ryea_

PDB Entry: 3rye, 2.1 Å

PDB Description: Human FDPS Synthase in Complex with a N-Methyl Pyridinum Bisphosphonate

PDB Compounds: (A:) farnesyl pyrophosphate synthase

SCOPe Domain Sequences for d3ryea_:

Sequence, based on SEQRES records:

>d3ryea_ a.128.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dvyaqekqdfvqhfsqivrvltedemghpeigdaiarlkevleynaiggkynrgltvvva
frelveprkqdadslqrawtvgwcvellqafflvaddimdssltrrgqicwyqkpgvgld
aindanlleaciyrllklycreqpyylnlielflqssyqteigqtldlltapqgnvdlvr
ftekryksivkyktafysfylpiaaamymagidgekehanakkillemgeffqiqddyld
lfgdpsvtgkigtdiqdnkcswlvvqclqratpeqyqilkenygqkeaekvarvkalyee
ldlpavflqyeedsyshimalieqyaaplppavflglarkiyk

Sequence, based on observed residues (ATOM records):

>d3ryea_ a.128.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dvyaqekqdfvqhfsqivrvltedehpeigdaiarlkevleynaiggkynrgltvvvafr
elveprkqdadslqrawtvgwcvellqafflvaddimdssltrrgqicwyqkpgvgldai
ndanlleaciyrllklycreqpyylnlielflqssyqteigqtldlltapqgnvdlvrft
ekryksivkyktafysfylpiaaamymagidgekehanakkillemgeffqiqddyldlf
gdpsvtgkigtdiqdnkcswlvvqclqratpeqyqilkenygqkeaekvarvkalyeeld
lpavflqyeedsyshimalieqyaaplppavflglarkiyk

Timeline for d3ryea_:

• d3ryea_ is new in SCOPe 2.01-stable
  
• d3ryea_ appears in SCOPe 2.02
  
• d3ryea_ appears in the current release, SCOPe 2.08