SCOPe 2.08: Domain d3rrcb1: 3rrc B:211-508

Lineage for d3rrcb1 (3rrc B:211-508)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.264: Duffy binding domain-like [140923] (1 superfamily)
   consist of two subdomains, each containing a three-helical bundle

4. Superfamily a.264.1: Duffy binding domain-like [140924] (2 families)
   automatically mapped to Pfam PF05424

5. Family a.264.1.1: Duffy binding domain [140925] (3 proteins)
   Pfam PF05424

6. Protein automated matches [191262] (2 species)
   not a true protein

7. Species Plasmodium vivax [TaxId:126793] [189825] (5 PDB entries)

8. Domain d3rrcb1: 3rrc B:211-508 [185129]
   Other proteins in same PDB: d3rrca2, d3rrcb2
   automated match to d2c6ja1
   complexed with edo, po4

Details for d3rrcb1

PDB Entry: 3rrc, 1.95 Å

PDB Description: crystal structure of region ii from plasmodium vivax duffy binding protein

PDB Compounds: (B:) Duffy receptor

SCOPe Domain Sequences for d3rrcb1:

Sequence, based on SEQRES records:

>d3rrcb1 a.264.1.1 (B:211-508) automated matches {Plasmodium vivax [TaxId: 126793]}
ntvmkncnykrkrrerdwdcntkkdvcipdrryqlcmkeltnlvnntdtnfhrditfrkl
ylkrkliydaavegdlllklnnyrynkdfckdirwslgdfgdiimgtdmegigyskvven
nlrsifgtdekaqqrrkqwwneskaqiwtammysvkkrlkgnfiwicklnvavniepqiy
rwirewgrdyvselptevqklkekcdgkinytdkkvckvppcqnacksydqwitrkknqw
dvlsnkfisvknaekvqtagivtpydilkqeldefnevafeneinkrdgayielcvcs

Sequence, based on observed residues (ATOM records):

>d3rrcb1 a.264.1.1 (B:211-508) automated matches {Plasmodium vivax [TaxId: 126793]}
ntvmkncnykrkrrerdwdcntkkdvcipdrryqlcmkeltnlylkrkliydaavegdll
lklnnyrynkdfckdirwslgdfgdiimgtdmegigyskvvennlrsifgtdekaqqrrk
qwwneskaqiwtammysvkkrlkgnfiwicklnvavniepqiyrwirewgrdyvselpte
vqklkekcdgkinytdkkvckvppcqnacksydqwitrkknqwdvlsnkfisvknaetag
ivtpydilkqeldefnevafeneinkrdgayielcvcs

Timeline for d3rrcb1:

• d3rrcb1 first appeared in SCOPe 2.01, called d3rrcb_
  
• d3rrcb1 appears in SCOPe 2.07