SCOPe 2.01: Domain d3r9ab_: 3r9a B:

Lineage for d3r9ab_ (3r9a B:)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (9 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (18 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein automated matches [190103] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186825] (6 PDB entries)

8. Domain d3r9ab_: 3r9a B: [184856]
   Other proteins in same PDB: d3r9aa_, d3r9ac_
   automated match to d1fcha_
   complexed with btb

Details for d3r9ab_

PDB Entry: 3r9a, 2.35 Å

PDB Description: Human alanine-glyoxylate aminotransferase in complex with the TPR domain of human PEX5P

PDB Compounds: (B:) peroxisomal targeting signal 1 receptor

SCOPe Domain Sequences for d3r9ab_:

Sequence, based on SEQRES records:

>d3r9ab_ a.118.8.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvtpae
egaggaglgpskrilgsllsdslflevkelflaavrldptsidpdvqcglgvlfnlsgey
dkavdcftaalsvrpndyllwnklgatlangnqseeavaayrralelqpgyirsrynlgi
scinlgahreavehflealnmqrksrgprgeggamseniwstlrlalsmlgqsdaygaad
ardlstlltmfglpq

Sequence, based on observed residues (ATOM records):

>d3r9ab_ a.118.8.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvdslf
levkelflaavrldptsidpdvqcglgvlfnlsgeydkavdcftaalsvrpndyllwnkl
gatlangnqseeavaayrralelqpgyirsrynlgiscinlgahreavehflealnmqrk
srrgeggamseniwstlrlalsmlgqsdaygaadardlstlltmfglpq

Timeline for d3r9ab_:

• d3r9ab_ is new in SCOPe 2.01-stable
  
• d3r9ab_ appears in SCOPe 2.02
  
• d3r9ab_ appears in the current release, SCOPe 2.08