SCOPe 2.08: Domain d3qynd1: 3qyn D:127-320

Lineage for d3qynd1 (3qyn D:127-320)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (8 families)

5. Family b.2.5.2: p53 DNA-binding domain-like [81314] (3 proteins)

6. Protein automated matches [190198] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186941] (51 PDB entries)

8. Domain d3qynd1: 3qyn D:127-320 [184707]
   Other proteins in same PDB: d3qyna2, d3qynb2, d3qync2, d3qynd2
   automated match to d1gzha_
   protein/DNA complex; complexed with zn

Details for d3qynd1

PDB Entry: 3qyn, 2.5 Å

PDB Description: Structure of p63 DNA Binding Domain in Complex with a 22 Base Pair A/T Rich Response Element Containing 2 Base Pair Spacer Between Half Sites

PDB Compounds: (D:) Tumor protein 63

SCOPe Domain Sequences for d3qynd1:

Sequence, based on SEQRES records:

>d3qynd1 b.2.5.2 (D:127-320) automated matches {Human (Homo sapiens) [TaxId: 9606]}
psntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavi
rampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqs
vlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearic
acpgrdrkadedsi

Sequence, based on observed residues (ATOM records):

>d3qynd1 b.2.5.2 (D:127-320) automated matches {Human (Homo sapiens) [TaxId: 9606]}
psntdypgphsfdvsfqatwtystelkklycqiaktcpiqikvmtpppqgavirampvyk
kaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyep
pqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicacpgrdr
kadedsi

Timeline for d3qynd1:

• d3qynd1 first appeared in SCOPe 2.01, called d3qynd_
  
• d3qynd1 appears in SCOPe 2.07