SCOPe 2.08: Domain d3qs6a1: 3qs6 A:5-513

Lineage for d3qs6a1 (3qs6 A:5-513)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.54: SNF-like [161069] (1 superfamily)
   12 transmembrane helices; duplication: consists of two structurally similar halves

4. Superfamily f.54.1: SNF-like [161070] (3 families)

5. Family f.54.1.1: SNF-like [161071] (2 proteins)
   Pfam PF00209; Sodium:neurotransmitter symporter

6. Protein automated matches [190994] (2 species)
   not a true protein

7. Species Aquifex aeolicus [TaxId:63363] [188708] (7 PDB entries)

8. Domain d3qs6a1: 3qs6 A:5-513 [184607]
   Other proteins in same PDB: d3qs6a2
   automated match to d2a65a1
   complexed with bog, na, trp; mutant

Details for d3qs6a1

PDB Entry: 3qs6, 2.8 Å

PDB Description: crystal structure of leut mutant f259v,i359q bound to sodium and l- tryptophan

PDB Compounds: (A:) Na(+):neurotransmitter symporter (Snf family)

SCOPe Domain Sequences for d3qs6a1:

Sequence, based on SEQRES records:

>d3qs6a1 f.54.1.1 (A:5-513) automated matches {Aquifex aeolicus [TaxId: 63363]}
rehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiewa
mgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikflv
glvpepppnatdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsili
rgiskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgvw
iaavgqifftlslgvgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaava
ffgvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaqmqpmi
afledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliiff
wifgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkimeethwtvw
itrfyiiglflfltflvflaerrrnhesa

Sequence, based on observed residues (ATOM records):

>d3qs6a1 f.54.1.1 (A:5-513) automated matches {Aquifex aeolicus [TaxId: 63363]}
rehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiewa
mgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikflv
glvpeppptdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsilirg
iskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgvwia
avgqifftlslgvgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaavaff
gvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaqmqpmiaf
ledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliiffwi
fgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkimeethwtvwit
rfyiiglflfltflvflaerrrnhesa

Timeline for d3qs6a1:

• d3qs6a1 first appeared in SCOPe 2.01, called d3qs6a_
  
• d3qs6a1 appears in SCOPe 2.07