SCOPe 2.06: Domain d3qs5a1: 3qs5 A:5-513

Lineage for d3qs5a1 (3qs5 A:5-513)

1. Root: SCOPe 2.06

2. Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)

3. Fold f.54: SNF-like [161069] (1 superfamily)
   12 transmembrane helices; duplication: consists of two structurally similar halves

4. Superfamily f.54.1: SNF-like [161070] (1 family)

5. Family f.54.1.1: SNF-like [161071] (2 proteins)
   Pfam PF00209; Sodium:neurotransmitter symporter

6. Protein automated matches [190994] (2 species)
   not a true protein

7. Species Aquifex aeolicus [TaxId:63363] [188708] (4 PDB entries)

8. Domain d3qs5a1: 3qs5 A:5-513 [184606]
   Other proteins in same PDB: d3qs5a2
   automated match to d2a65a1
   complexed with bog, na, trp; mutant

Details for d3qs5a1

PDB Entry: 3qs5, 2.6 Å

PDB Description: crystal structure of leut mutant i359q bound to sodium and l- tryptophan

PDB Compounds: (A:) Na(+):neurotransmitter symporter (Snf family)

SCOPe Domain Sequences for d3qs5a1:

Sequence, based on SEQRES records:

>d3qs5a1 f.54.1.1 (A:5-513) automated matches {Aquifex aeolicus [TaxId: 63363]}
rehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiewa
mgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikflv
glvpepppnatdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsili
rgiskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgvw
iaavgqifftlslgfgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaava
ffgvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaqmqpmi
afledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliiff
wifgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkimeethwtvw
itrfyiiglflfltflvflaerrrnhesa

Sequence, based on observed residues (ATOM records):

>d3qs5a1 f.54.1.1 (A:5-513) automated matches {Aquifex aeolicus [TaxId: 63363]}
rehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiewa
mgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikflv
glvpeppptdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsilirg
iskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgvwia
avgqifftlslgfgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaavaff
gvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaqmqpmiaf
ledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliiffwi
fgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkimeethwtvwit
rfyiiglflfltflvflaerrrnhesa

Timeline for d3qs5a1:

• d3qs5a1 first appeared in SCOPe 2.01, called d3qs5a_
  
• d3qs5a1 was called d3qs5a_ in SCOPe 2.05
  
• d3qs5a1 appears in SCOPe 2.07
  
• d3qs5a1 appears in the current release, SCOPe 2.08