SCOPe 2.06: Domain d3qq0a_: 3qq0 A:

Lineage for d3qq0a_ (3qq0 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein automated matches [190083] (9 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [189819] (16 PDB entries)

8. Domain d3qq0a_: 3qq0 A: [184565]
   automated match to d1g7ua_
   complexed with cl, gol, na; mutant

Details for d3qq0a_

PDB Entry: 3qq0, 1.9 Å

PDB Description: Crystal structure of a deletion mutant (N59) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

PDB Compounds: (A:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d3qq0a_:

Sequence, based on SEQRES records:

>d3qq0a_ c.1.10.4 (A:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkars
sihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtdl
vvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlgf
gvmkqtcgnlpvifdvthslqtrdagsaasggrraqaldlalagmatrlaglfleshpdp
klakcdgpsalplhlledflirikalddliksqpi

Sequence, based on observed residues (ATOM records):

>d3qq0a_ c.1.10.4 (A:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkars
sisvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtdlvvam
aktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlgfgvmk
qtcgnlpvifdvthslqraqaldlalagmatrlaglfleslhlledflirikalddliks
qpi

Timeline for d3qq0a_:

• d3qq0a_ first appeared in SCOPe 2.01
  
• d3qq0a_ appears in SCOPe 2.05
  
• d3qq0a_ appears in SCOPe 2.07
  
• d3qq0a_ appears in the current release, SCOPe 2.08