Lineage for d3qjmb_ (3qjm B:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2056344Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. 2056345Superfamily b.36.1: PDZ domain-like [50156] (7 families) (S)
    peptide-binding domain
  5. 2056346Family b.36.1.1: PDZ domain [50157] (47 proteins)
    Pfam PF00595
  6. 2056550Protein Shank1, PDZ domain [101733] (1 species)
    SH3 and multiple ankyrin repeat domains protein 1
  7. 2056551Species Norway rat (Rattus norvegicus) [TaxId:10116] [101734] (5 PDB entries)
  8. 2056555Domain d3qjmb_: 3qjm B: [184442]
    automated match to d1q3ob_

Details for d3qjmb_

PDB Entry: 3qjm (more details), 2.31 Å

PDB Description: Structural flexibility of Shank PDZ domain is important for its binding to different ligands
PDB Compounds: (B:) SH3 and multiple ankyrin repeat domains protein 1

SCOPe Domain Sequences for d3qjmb_:

Sequence, based on SEQRES records: (download)

>d3qjmb_ b.36.1.1 (B:) Shank1, PDZ domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

Sequence, based on observed residues (ATOM records): (download)

>d3qjmb_ b.36.1.1 (B:) Shank1, PDZ domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gsdyiikektvllqkkdsegfgfvlrgaeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

SCOPe Domain Coordinates for d3qjmb_:

Click to download the PDB-style file with coordinates for d3qjmb_.
(The format of our PDB-style files is described here.)

Timeline for d3qjmb_:

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d3qjma_