Lineage for d3pz3b_ (3pz3 B:)

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 920404Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 920721Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (4 families) (S)
  5. 920846Family a.102.4.3: Protein prenyltransferases [48246] (3 proteins)
  6. 920950Protein Rab geranylgeranyltransferase, beta subunit [48249] (2 species)
  7. 920951Species Mouse (Mus musculus) [TaxId:10090] [189948] (3 PDB entries)
  8. 920953Domain d3pz3b_: 3pz3 B: [184089]
    automated match to d1dceb_
    complexed with ca, pz3, zn

Details for d3pz3b_

PDB Entry: 3pz3 (more details), 2 Å

PDB Description: crystal structure of rabggtase(delta lrr; delta ig) in complex with bms-analogue 14
PDB Compounds: (B:) Geranylgeranyl transferase type-2 subunit beta

SCOPe Domain Sequences for d3pz3b_:

Sequence, based on SEQRES records: (download)

>d3pz3b_ a.102.4.3 (B:) Rab geranylgeranyltransferase, beta subunit {Mouse (Mus musculus) [TaxId: 10090]}
qkdvtiksdapdtlllekhadyiasygskkddyeycmseylrmsgvywgltvmdlmgqlh
rmnkeeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvq
slqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcr
pgseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcysww
vlaslkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgee
qikpvspvfcmpeevlqrvnvqpelvs

Sequence, based on observed residues (ATOM records): (download)

>d3pz3b_ a.102.4.3 (B:) Rab geranylgeranyltransferase, beta subunit {Mouse (Mus musculus) [TaxId: 10090]}
qkdvtiksdapdtlllekhadyiasygsdyeycmseylrmsgvywgltvmdlmgqlhrmn
keeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvqslq
kedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrpgs
eshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwvla
slkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeqik
pvspvfcmpeevlqrvnvqpelvs

SCOPe Domain Coordinates for d3pz3b_:

Click to download the PDB-style file with coordinates for d3pz3b_.
(The format of our PDB-style files is described here.)

Timeline for d3pz3b_: