Lineage for d3ptfd_ (3ptf D:)

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1017615Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1017616Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1017617Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1017750Protein Ubiquitin [54238] (4 species)
  7. 1017759Species Human (Homo sapiens) [TaxId:9606] [54239] (101 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1017892Domain d3ptfd_: 3ptf D: [183971]
    Other proteins in same PDB: d3ptfa_, d3ptfb_
    automated match to d1aara_

Details for d3ptfd_

PDB Entry: 3ptf (more details), 2.7 Å

PDB Description: X-ray structure of the non-covalent complex between UbcH5A and Ubiquitin
PDB Compounds: (D:) Polyubiquitin-B

SCOPe Domain Sequences for d3ptfd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ptfd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
hmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrl

SCOPe Domain Coordinates for d3ptfd_:

Click to download the PDB-style file with coordinates for d3ptfd_.
(The format of our PDB-style files is described here.)

Timeline for d3ptfd_: