SCOPe 2.08: Domain d3pnmd_: 3pnm D:

Lineage for d3pnmd_ (3pnm D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.119: DAK1/DegV-like [82548] (1 superfamily)
   2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]

4. Superfamily c.119.1: DAK1/DegV-like [82549] (3 families)
   domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different

5. Family c.119.1.2: DAK1 [109613] (3 proteins)
   Pfam PF02733

6. Protein automated matches [191219] (1 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [189602] (6 PDB entries)

8. Domain d3pnmd_: 3pnm D: [183879]
   automated match to d1oi2a_

Details for d3pnmd_

PDB Entry: 3pnm, 2.55 Å

PDB Description: crystal structure of e.coli dha kinase dhak (h56a)

PDB Compounds: (D:) PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK

SCOPe Domain Sequences for d3pnmd_:

Sequence, based on SEQRES records:

>d3pnmd_ c.119.1.2 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
qdvldeqlaglakahpsltlhqdpvyvtradapvagkvallsgggsgaepmhcgyigqgm
lsgacpgeiftsptpdkifecamqvdggegvlliiknytgdilnfetatellhdsgvkvt
tvvidddvavkdslytagrrgvantvlieklvgaaaergdsldacaelgrklnnqghsig
ialgactvpaagkpsftladnemefgvgihgepgidrrpfssldqtvdemfdtllvngsy
hrtlrfwdyqqgswqeeqqtkqplqsgdrvialvnnlgatplselygvynrlttrcqqag
ltiernligayctsldmtgfsitllkvddetlalwdapvhtpalnwgk

Sequence, based on observed residues (ATOM records):

>d3pnmd_ c.119.1.2 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
qdvldeqlaglakahpsltlhqdpvyvtradapvagkvallsgggsgaepmhcgyigqgm
lsgacpgeiftsptpdkifecamqvdggegvlliiknytgdilnfetatellhdsgvkvt
tvvidddvavkdslytagrrgvantvlieklvgaaaergdsldacaelgrklnnqghsig
ialgactsftladnemefgvgihgepgidrrpfssldqtvdemfdtllvngsyhrtlrfw
dyqqgswqeeqqtkqplqsgdrvialvnnlgatplselygvynrlttrcqqagltiernl
igayctsldmtgfsitllkvddetlalwdapvhtpalnwgk

Timeline for d3pnmd_:

• d3pnmd_ first appeared in SCOPe 2.01
  
• d3pnmd_ appears in SCOPe 2.07