SCOPe 2.08: Domain d3pgyc1: 3pgy C:1-411

Lineage for d3pgyc1 (3pgy C:1-411)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein automated matches [190152] (25 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:93062] [189536] (1 PDB entry)

8. Domain d3pgyc1: 3pgy C:1-411 [183729]
   Other proteins in same PDB: d3pgyc2, d3pgyd2
   automated match to d1kkja_
   complexed with cit, edo, gly; mutant

Details for d3pgyc1

PDB Entry: 3pgy, 1.92 Å

PDB Description: serine hydroxymethyltransferase from staphylococcus aureus, s95p mutant.

PDB Compounds: (C:) serine hydroxymethyltransferase

SCOPe Domain Sequences for d3pgyc1:

Sequence, based on SEQRES records:

>d3pgyc1 c.67.1.4 (C:1-411) automated matches {Staphylococcus aureus [TaxId: 93062]}
msyitkqdkviaeaierefqrqnsnieliasenfvseavmeaqgsvltnkyaegypgrry
yggcefvdvtesiaidrakalfgaehvnvqphsgpqanmavylvalemgdtvlgmnlshg
ghlthgapvnfsgkfynfveygvdkdterinydevrklalehkpklivagasaysrtidf
kkfkeiadevnaklmvdmahiaglvaaglhpnpveyadfvtttthktlrgprggmilcke
eykkdidktifpgiqggplehviaakavafgealennfktyqqqvvknakvlaealineg
frivsggtdnhlvavdvkgsigltgkeaeetldsvgitcnkntipfdqekpfvtsgirlg
tpaattrgfdekafeevakiislalknskdeeklqqakervakltaeyply

Sequence, based on observed residues (ATOM records):

>d3pgyc1 c.67.1.4 (C:1-411) automated matches {Staphylococcus aureus [TaxId: 93062]}
msyitkqdkviaeaierefqrqnsnieliasenfvseavmeaqgsvltnkyaegypgrrg
gcefvdvtesiaidrakalfgaehvnvqphsgpqanmavylvalemgdtvlgmnvnfsgk
fynfveygvdkdterinydevrklalehkpklivagasaysrtidfkkfkeiadevnakl
mvdmahiaglvaaglhpnpveyadfvtttthktlrgprggmilckeeykkdidktifpgi
qggplehviaakavafgealennfktyqqqvvknakvlaealinegfrivsggtdnhlva
vdvkgsigltgkeaeetldsvgitcnkntipfdqekpfvtsgirlgtpaattrgfdekaf
eevakiislalknskdeeklqqakervakltaeyply

Timeline for d3pgyc1:

• d3pgyc1 first appeared in SCOPe 2.01, called d3pgyc_
  
• d3pgyc1 appears in SCOPe 2.07