SCOPe 2.08: Domain d3pgga_: 3pgg A:

Lineage for d3pgga_ (3pgg A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.38: Sm-like fold [50181] (5 superfamilies)
   core: barrel, open; n*=4, S*=8; meander; SH3-like topology

4. Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)

5. Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (11 proteins)
   forms homo and heteroheptameric ring structures
   Pfam PF01423

6. Protein U6 snRNA-associated sm-like protein LSM5 [141291] (1 species)

7. Species Cryptosporidium parvum [TaxId:5807] [141292] (2 PDB entries)
   Uniprot Q5CXX3 24-115

8. Domain d3pgga_: 3pgg A: [183713]

Details for d3pgga_

PDB Entry: 3pgg, 2.14 Å

PDB Description: crystal structure of cryptosporidium parvum u6 snrna-associated sm- like protein lsm5

PDB Compounds: (A:) U6 snRNA-associated Sm-like protein LSm5. SM domain

SCOPe Domain Sequences for d3pgga_:

Sequence, based on SEQRES records:

>d3pgga_ b.38.1.1 (A:) U6 snRNA-associated sm-like protein LSM5 {Cryptosporidium parvum [TaxId: 5807]}
niilplalidkcignriyvvmkgdkefsgvlrgfdeyvnmvlddvqeygfkadeedisgg
nkklkrvmvnrletillsgnnvamlvpgg

Sequence, based on observed residues (ATOM records):

>d3pgga_ b.38.1.1 (A:) U6 snRNA-associated sm-like protein LSM5 {Cryptosporidium parvum [TaxId: 5807]}
niilplalidkcignriyvvmkgdkefsgvlrgfdeyvnmvlddvqeygfkadkrvmvnr
letillsgnnvamlvpgg

Timeline for d3pgga_:

• d3pgga_ first appeared in SCOPe 2.01
  
• d3pgga_ appears in SCOPe 2.07