Lineage for d3pedb_ (3ped B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2062521Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2062522Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 2062523Family b.60.1.1: Retinol binding protein-like [50815] (22 protein domains)
    barrel, closed; n=8, S=12, meander
  6. 2062687Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  7. 2062688Species Human (Homo sapiens) [TaxId:9606] [50836] (35 PDB entries)
  8. 2062706Domain d3pedb_: 3ped B: [183683]
    automated match to d1ngla_
    complexed with fe, so4, zyf

Details for d3pedb_

PDB Entry: 3ped (more details), 2.3 Å

PDB Description: Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis
PDB Compounds: (B:) Neutrophil gelatinase-associated lipocalin

SCOPe Domain Sequences for d3pedb_:

Sequence, based on SEQRES records: (download)

>d3pedb_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d3pedb_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3pedb_:

Click to download the PDB-style file with coordinates for d3pedb_.
(The format of our PDB-style files is described here.)

Timeline for d3pedb_: