SCOPe 2.07: Domain d3p8ra1: 3p8r A:3-294

Lineage for d3p8ra1 (3p8r A:3-294)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)

6. Protein automated matches [190489] (5 species)
   not a true protein

7. Species Vibrio cholerae [TaxId:666] [189533] (1 PDB entry)

8. Domain d3p8ra1: 3p8r A:3-294 [183590]
   Other proteins in same PDB: d3p8ra2
   automated match to d1rqja_

Details for d3p8ra1

PDB Entry: 3p8r, 2.5 Å

PDB Description: crystal structure of polyprenyl synthase from vibrio cholerae

PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d3p8ra1:

Sequence, based on SEQRES records:

>d3p8ra1 a.128.1.1 (A:3-294) automated matches {Vibrio cholerae [TaxId: 666]}
ealssyqqrnnqqldqwlnripfqtlplieamryglllggkrarpylvyitgqmlgcels
dldtpasavecihayslihddlpamdddelrrgkptchiqfdeatailtgdalqtlafti
laegdlsaagetqrvamlqalaeasgaqgmclgqaldlaaenrlisleeletihrnktga
lmrcairlgalaagekgramlphldryaeavglafqvqddildiisdtetlgkpqgsdqe
lnkstypallglegaqqkahtllqeallaleaipyntehleefaryvverkn

Sequence, based on observed residues (ATOM records):

>d3p8ra1 a.128.1.1 (A:3-294) automated matches {Vibrio cholerae [TaxId: 666]}
ealssyqqrnnqqldqwlnripfqtlplieamryglllggkrarpylvyitgqmlgcels
dldtpasavecihayslihddlpamdddeatailtgdalqtlaftilaegdlsaagetqr
vamlqalaeasgaqgmclgqaldlaaenrlisleeletihrnktgalmrcairlgalaag
ekgramlphldryaeavglafqvqddildiisdkstypallglegaqqkahtllqealla
leaipyntehleefaryvverkn

Timeline for d3p8ra1:

• d3p8ra1 first appeared in SCOPe 2.01, called d3p8ra_
  
• d3p8ra1 appears in SCOPe 2.06
  
• d3p8ra1 appears in the current release, SCOPe 2.08