Lineage for d3p8ra_ (3p8r A:)

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1749121Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 1749122Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 1749123Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)
  6. 1749162Protein automated matches [190489] (5 species)
    not a true protein
  7. 1749238Species Vibrio cholerae [TaxId:666] [189533] (1 PDB entry)
  8. 1749239Domain d3p8ra_: 3p8r A: [183590]
    automated match to d1rqja_

Details for d3p8ra_

PDB Entry: 3p8r (more details), 2.5 Å

PDB Description: crystal structure of polyprenyl synthase from vibrio cholerae
PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d3p8ra_:

Sequence, based on SEQRES records: (download)

>d3p8ra_ a.128.1.1 (A:) automated matches {Vibrio cholerae [TaxId: 666]}
hhhslealssyqqrnnqqldqwlnripfqtlplieamryglllggkrarpylvyitgqml
gcelsdldtpasavecihayslihddlpamdddelrrgkptchiqfdeatailtgdalqt
laftilaegdlsaagetqrvamlqalaeasgaqgmclgqaldlaaenrlisleeletihr
nktgalmrcairlgalaagekgramlphldryaeavglafqvqddildiisdtetlgkpq
gsdqelnkstypallglegaqqkahtllqeallaleaipyntehleefaryvverkn

Sequence, based on observed residues (ATOM records): (download)

>d3p8ra_ a.128.1.1 (A:) automated matches {Vibrio cholerae [TaxId: 666]}
hhhslealssyqqrnnqqldqwlnripfqtlplieamryglllggkrarpylvyitgqml
gcelsdldtpasavecihayslihddlpamdddeatailtgdalqtlaftilaegdlsaa
getqrvamlqalaeasgaqgmclgqaldlaaenrlisleeletihrnktgalmrcairlg
alaagekgramlphldryaeavglafqvqddildiisdkstypallglegaqqkahtllq
eallaleaipyntehleefaryvverkn

SCOPe Domain Coordinates for d3p8ra_:

Click to download the PDB-style file with coordinates for d3p8ra_.
(The format of our PDB-style files is described here.)

Timeline for d3p8ra_: