SCOPe 2.04: Domain d1em9b_: 1em9 B:

Lineage for d1em9b_ (1em9 B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
   core: 5 helices; bundle

4. Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families)

5. Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)

6. Protein RSV capsid protein [47951] (1 species)

7. Species Rous sarcoma virus [TaxId:11886] [47952] (3 PDB entries)

8. Domain d1em9b_: 1em9 B: [18334]
   N-terminal domain only
   complexed with mg

Details for d1em9b_

PDB Entry: 1em9, 2.05 Å

PDB Description: rous sarcoma virus capsid protein: n-terminal domain

PDB Compounds: (B:) gag polyprotein capsid protein p27

SCOPe Domain Sequences for d1em9b_:

Sequence, based on SEQRES records:

>d1em9b_ a.73.1.1 (B:) RSV capsid protein {Rous sarcoma virus [TaxId: 11886]}
pvviktegpawtplepklitrladtvrtkglrspitmaevealmsspllphdvtnlmrvi
lgpapyalwmdawgvqlqtviaaatrdprhpangqgrgertnlnrlkgladgmvgnpqgq
aallrpgelvaitasalqafrevarla

Sequence, based on observed residues (ATOM records):

>d1em9b_ a.73.1.1 (B:) RSV capsid protein {Rous sarcoma virus [TaxId: 11886]}
pvvikpawtplepklitrladtvrtkglrspitmaevealmsspllphdvtnlmrvilgp
apyalwmdawgvqlqtviaaatrdprhpangqertnlnrlkgladgmvgnpqgqaallrp
gelvaitasalqafrevarla

Timeline for d1em9b_:

• d1em9b_ first appeared (with stable ids) in SCOP 1.55
  
• d1em9b_ appears in SCOPe 2.03
  
• d1em9b_ appears in SCOPe 2.05
  
• d1em9b_ appears in the current release, SCOPe 2.08