Lineage for d3ogoc_ (3ogo C:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2508387Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2508388Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2508389Family d.22.1.1: Fluorescent proteins [54512] (6 protein domains)
  6. 2508393Protein Green fluorescent protein, GFP [54513] (4 species)
  7. 2508399Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (203 PDB entries)
    Uniprot P42212
  8. 2508624Domain d3ogoc_: 3ogo C: [183013]
    Other proteins in same PDB: d3ogoe_, d3ogof_, d3ogog_, d3ogoh1, d3ogoh2
    automated match to d1qyoa_
    complexed with ipa

Details for d3ogoc_

PDB Entry: 3ogo (more details), 2.8 Å

PDB Description: Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212
PDB Compounds: (C:) Green fluorescent protein

SCOPe Domain Sequences for d3ogoc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ogoc_ d.22.1.1 (C:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}

SCOPe Domain Coordinates for d3ogoc_:

Click to download the PDB-style file with coordinates for d3ogoc_.
(The format of our PDB-style files is described here.)

Timeline for d3ogoc_: