Lineage for d3od5a_ (3od5 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2100990Fold c.17: Caspase-like [52128] (1 superfamily)
    3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest
  4. 2100991Superfamily c.17.1: Caspase-like [52129] (3 families) (S)
    mature protein may be composed of two chains folded in a single domain
  5. 2101162Family c.17.1.0: automated matches [191651] (1 protein)
    not a true family
  6. 2101163Protein automated matches [191201] (1 species)
    not a true protein
  7. 2101164Species Human (Homo sapiens) [TaxId:9606] [189525] (14 PDB entries)
  8. 2101165Domain d3od5a_: 3od5 A: [182943]
    automated match to d1cp3a_
    complexed with cac

Details for d3od5a_

PDB Entry: 3od5 (more details), 1.6 Å

PDB Description: Crystal structure of active caspase-6 bound with Ac-VEID-CHO
PDB Compounds: (A:) Caspase-6

SCOPe Domain Sequences for d3od5a_:

Sequence, based on SEQRES records: (download)

>d3od5a_ c.17.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fdpaekykmdhrrrgialifnherffwhltlperrgtcadrdnltrrfsdlgfevkcfnd
lkaeelllkihevstvshadadcfvcvflshgegnhiyaydakieiqtltglfkgdkchs
lvgkpkifiiqacrgnqhdvpvipldvvdnqtekldtnitevdaasvytlpagadflmcy
svaegyyshretvngswyiqdlcemlgkygssleftelltlvnrkvsqrrvdfckdpsai
gkkqvpcfasmltkklhffpk

Sequence, based on observed residues (ATOM records): (download)

>d3od5a_ c.17.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fdpaekykmdhrrrgialifnherffwhltlperrgtcadrdnltrrfsdlgfevkcfnd
lkaeelllkihevstvshadadcfvcvflshgegnhiyaydakieiqtltglfkgdkchs
lvgkpkifiiqacrgnqhdvpviplvytlpagadflmcysvaegyyshretvngswyiqd
lcemlgkygssleftelltlvnrkvsqrrvdfckdpsaigkkqvpcfasmltkklhffpk

SCOPe Domain Coordinates for d3od5a_:

Click to download the PDB-style file with coordinates for d3od5a_.
(The format of our PDB-style files is described here.)

Timeline for d3od5a_: