Lineage for d3n4ka1 (3n4k A:1-161)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150176Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase [75218] (5 protein domains)
    contains extra strand (3) in the parallel beta-sheet, order 321546
  6. 2150197Protein automated matches [191165] (2 species)
    not a true protein
  7. 2150200Species Yersinia pestis [TaxId:214092] [189377] (2 PDB entries)
  8. 2150202Domain d3n4ka1: 3n4k A:1-161 [181894]
    Other proteins in same PDB: d3n4ka2, d3n4kb2
    automated match to d1j85a_
    protein/RNA complex; complexed with sah

Details for d3n4ka1

PDB Entry: 3n4k (more details), 1.76 Å

PDB Description: putative rna methyltransferase from yersinia pestis in complex with s-adenosyl-l-homocysteine.
PDB Compounds: (A:) RNA methyltransferase

SCOPe Domain Sequences for d3n4ka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3n4ka1 c.116.1.1 (A:1-161) automated matches {Yersinia pestis [TaxId: 214092]}

SCOPe Domain Coordinates for d3n4ka1:

Click to download the PDB-style file with coordinates for d3n4ka1.
(The format of our PDB-style files is described here.)

Timeline for d3n4ka1:

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