Lineage for d3n3kb_ (3n3k B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931514Protein Ubiquitin [54238] (9 species)
  7. 2931628Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2932097Domain d3n3kb_: 3n3k B: [181875]
    Other proteins in same PDB: d3n3ka_
    automated match to d2zcca1
    complexed with zn

Details for d3n3kb_

PDB Entry: 3n3k (more details), 2.6 Å

PDB Description: the catalytic domain of usp8 in complex with a usp8 specific inhibitor
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d3n3kb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3n3kb_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mrivvktlmgrtiilevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
ihnhsalylllklr

SCOPe Domain Coordinates for d3n3kb_:

Click to download the PDB-style file with coordinates for d3n3kb_.
(The format of our PDB-style files is described here.)

Timeline for d3n3kb_:

2932097
d3n3kb_ in context of PDB
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Domains from other chains:
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d3n3ka_