SCOPe 2.01: Domain d3mz4a_: 3mz4 A:

Lineage for d3mz4a_ (3mz4 A:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.2: Histone deacetylase, HDAC [52773] (4 proteins)

6. Protein automated matches [190786] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188039] (13 PDB entries)

8. Domain d3mz4a_: 3mz4 A: [181722]
   automated match to d1t64a_
   complexed with b3n, gol, k, mn

Details for d3mz4a_

PDB Entry: 3mz4, 1.84 Å

PDB Description: Crystal structure of D101L Mn2+ HDAC8 complexed with M344

PDB Compounds: (A:) Histone deacetylase 8

SCOPe Domain Sequences for d3mz4a_:

Sequence, based on SEQRES records:

>d3mz4a_ c.42.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsqegdddhpdsieyglgylcpategifdyaaaiggatitaaqclidgmckv
ainwsggwhhakkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsfts
kvmtvslhkfspgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyq
afnpkavvlqlgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlantar
cwtyltgvilgktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnl
khvvi

Sequence, based on observed residues (ATOM records):

>d3mz4a_ c.42.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtd
aylqhlqkvsqeyglgylcpategifdyaaaiggatitaaqclidgmckvainwsggwhh
akkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsftskvmtvslhkf
spgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyqafnpkavvlq
lgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlantarcwtyltgvil
gktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnlkhvvi

Timeline for d3mz4a_:

• d3mz4a_ is new in SCOPe 2.01-stable
  
• d3mz4a_ appears in SCOPe 2.02
  
• d3mz4a_ appears in the current release, SCOPe 2.08, called d3mz4a1