Lineage for d3mkmb_ (3mkm B:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2153626Fold c.70: Nucleoside hydrolase [53589] (1 superfamily)
    core: 3 layers, a/b/a ; mixed beta-sheet of 8 strands, order 32145687; strand 7 is antiparallel to the rest
  4. 2153627Superfamily c.70.1: Nucleoside hydrolase [53590] (2 families) (S)
  5. 2153628Family c.70.1.1: Nucleoside hydrolase [53591] (5 proteins)
    automatically mapped to Pfam PF01156
  6. 2153655Protein Pyrimidine nucleoside hydrolase YeiK [102633] (1 species)
  7. 2153656Species Escherichia coli [TaxId:562] [102634] (3 PDB entries)
  8. 2153666Domain d3mkmb_: 3mkm B: [181351]
    automated match to d1q8fa_
    complexed with ca

Details for d3mkmb_

PDB Entry: 3mkm (more details), 2.2 Å

PDB Description: Crystal structure of the E. coli pyrimidine nucleoside hydrolase YeiK (Apo-form)
PDB Compounds: (B:) Putative uncharacterized protein YeiK

SCOPe Domain Sequences for d3mkmb_:

Sequence, based on SEQRES records: (download)

>d3mkmb_ c.70.1.1 (B:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]}
ekrkiildcdpghddaiaimmaakhpaidllgitivagnqtldktlinglnvcqkleinv
pvyagmpqpimrqqivadnihgdtgldgpvfepltrqaesthavkyiidtlmasdgditl
vpvgplsniavamrmqpailpkireivlmggaygtgnftpsaefnifadpeaarvvftsg
vplvmmgldltnqtvctpdviarmeraggpagelfsdimnftlktqfenyglaggpvhda
tcigylinpdgiktqemyvevdvnsgpcygrtvcdelgvlgkpantkvgitidtdwfwgl
veecvrgyik

Sequence, based on observed residues (ATOM records): (download)

>d3mkmb_ c.70.1.1 (B:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]}
ekrkiildcdpghddaiaimmaakhpaidllgitivagnqtldktlinglnvcqkleinv
pvyagmpqpimrqqivaddtgldgpvfepltrqaesthavkyiidtlmasdgditlvpvg
plsniavamrmqpailpkireivlmggaygtgnftpsaefnifadpeaarvvftsgvplv
mmgldltnqtvctpdviarmeraggpagelfsdimnftlktqfeaggpvhdatcigylin
pdgiktqemyvevdvnsgpcygrtvcdelgvlgkpantkvgitidtdwfwglveecvrgy
ik

SCOPe Domain Coordinates for d3mkmb_:

Click to download the PDB-style file with coordinates for d3mkmb_.
(The format of our PDB-style files is described here.)

Timeline for d3mkmb_: