SCOPe 2.08: Domain d3ljqa_: 3ljq A:

Lineage for d3ljqa_ (3ljq A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.5: (Glycosyl)asparaginase [56261] (2 proteins)
   automatically mapped to Pfam PF01112

6. Protein automated matches [191198] (1 species)
   not a true protein

7. Species Flavobacterium meningosepticum [TaxId:238] [189513] (1 PDB entry)

8. Domain d3ljqa_: 3ljq A: [180326]
   Other proteins in same PDB: d3ljqc2
   automated match to d9gaca_
   complexed with gly, na

Details for d3ljqa_

PDB Entry: 3ljq, 1.9 Å

PDB Description: crystal structure of the glycosylasparaginase t152c apo-precursor

PDB Compounds: (A:) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase

SCOPe Domain Sequences for d3ljqa_:

Sequence, based on SEQRES records:

>d3ljqa_ d.153.1.5 (A:) automated matches {Flavobacterium meningosepticum [TaxId: 238]}
tnkpivlstwnfglhanveawkvlskggkaldavekgvrlveddptersvgyggrpdrdg
rvtldacimdenynigsvacmehiknpisvaravmektphvmlvgdgalefalsqgfkke
nlltaesekewkewlktsqykpivnienhdcigmialdaqgnlsgacttsgmaykmhgrv
gdspiigaglfvdneigaatatghgeevirtvgthlvvelmnqgrtpqqackeaverivk
ivnrrgknlkdiqvgfialnkkgeygayciqdgfnfavhdqkgnrletpgfalk

Sequence, based on observed residues (ATOM records):

>d3ljqa_ d.153.1.5 (A:) automated matches {Flavobacterium meningosepticum [TaxId: 238]}
tnkpivlstwnfglhanveawkvlskggkaldavekgvrlveddptersvgyggrpdrdg
rvtldacimdenynigsvacmehiknpisvaravmektphvmlvgdgalefalsqgfkke
nlltaesekewkewlkdcigmialdaqgnlsgacttsgmaykmhgrvgdspiigaglfvd
neigaatatghgeevirtvgthlvvelmnqgrtpqqackeaverivkivnrrgknlkdiq
vgfialnkkgeygayciqdgfnfavhdqkgnrletpgfalk

Timeline for d3ljqa_:

• d3ljqa_ first appeared in SCOPe 2.01
  
• d3ljqa_ appears in SCOPe 2.07