SCOPe 2.08: Domain d3ko8a_: 3ko8 A:

Lineage for d3ko8a_ (3ko8 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Pyrobaculum calidifontis [TaxId:410359] [189396] (6 PDB entries)

8. Domain d3ko8a_: 3ko8 A: [179501]
   automated match to d2b69a1
   complexed with nad, po4

Details for d3ko8a_

PDB Entry: 3ko8, 1.8 Å

PDB Description: Crystal Structure of UDP-galactose 4-epimerase

PDB Compounds: (A:) NAD-dependent epimerase/dehydratase

SCOPe Domain Sequences for d3ko8a_:

Sequence, based on SEQRES records:

>d3ko8a_ c.2.1.0 (A:) automated matches {Pyrobaculum calidifontis [TaxId: 410359]}
mrivvtggagfigshlvdklvelgyevvvvdnlssgrrefvnpsaelhvrdlkdyswgag
ikgdvvfhfaanpevrlsttepivhfnenvvatfnvlewarqtgvrtvvfassstvygda
dviptpeeepykpisvygaakaagevmcatyarlfgvrclavryanvvgprlrhgviydf
imklrrnpnvlevlgdgtqrksylyvrdaveatlaawkkfeemdapflalnvgnvdavrv
ldiaqivaevlglrpeirlvpstpdgrgwpgdvkymtlavtklmkltgwrptmtsaeavk
ktaedlakelw

Sequence, based on observed residues (ATOM records):

>d3ko8a_ c.2.1.0 (A:) automated matches {Pyrobaculum calidifontis [TaxId: 410359]}
mrivvtggagfigshlvdklvelgyevvvvdnlssgrrefvnpsaelhvrdlkdyswgag
ikgdvvfhfaanpevrlsttepivhfnenvvatfnvlewarqtgvrtvvfassstvygda
dviptpeeepykpisvygaakaagevmcatyarlfgvrclavryanvvgprlrhgviydf
imklrrnpnvlevlqrksylyvrdaveatlaawkkfeemdapflalnvgnvdavrvldia
qivaevlglrpeirlvgdvkymtlavtklmkltgwrptmtsaeavkktaedlakelw

Timeline for d3ko8a_:

• d3ko8a_ first appeared in SCOPe 2.01
  
• d3ko8a_ appears in SCOPe 2.07