Lineage for d3khsd_ (3khs D:)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 996821Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 996837Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 997471Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 997472Protein automated matches [190781] (6 species)
    not a true protein
  7. 997513Species Grouper iridovirus [TaxId:127569] [189220] (1 PDB entry)
  8. 997517Domain d3khsd_: 3khs D: [179375]
    automated match to d1ulaa_
    complexed with po4, trs

Details for d3khsd_

PDB Entry: 3khs (more details), 2.38 Å

PDB Description: Crystal structure of grouper iridovirus purine nucleoside phosphorylase
PDB Compounds: (D:) purine nucleoside phosphorylase

SCOPe Domain Sequences for d3khsd_:

Sequence, based on SEQRES records: (download)

>d3khsd_ c.56.2.0 (D:) automated matches {Grouper iridovirus [TaxId: 127569]}
mtdydlaketaawlnkqlqirpvlgivcgsglgkigdsletsitvaysdipnfpvgsvkg
hagslifgsvngvscvcmkgrfhlyeghtaaratfpmrvfkalgvkivvltnaagglnps
yrpgdfmvvrdhinlpglaganpltgpnddtegerfpsmtsvydktlrkyaisaarelgm
syathegvyccvngpsfetpaeckilrlmgsdavgmstapetivakhggmrclavslisn
viasncetpaeptheevlrageeasarmtalvklviekirg

Sequence, based on observed residues (ATOM records): (download)

>d3khsd_ c.56.2.0 (D:) automated matches {Grouper iridovirus [TaxId: 127569]}
mtdydlaketaawlnkqlqirpvlgivcgsglgkigdsletsitvaysdipnfpvgslif
gsvngvscvcmkgrfhlyeghtaaratfpmrvfkalgvkivvltnaagglnpsyrpgdfm
vvrdhinlpglaganpltgpnddtegerfpsmtsvydktlrkyaisaarelgmsyatheg
vyccvngpsfetpaeckilrlmgsdavgmstapetivakhggmrclavslisnviasnce
ageeasarmtalvklviekirg

SCOPe Domain Coordinates for d3khsd_:

Click to download the PDB-style file with coordinates for d3khsd_.
(The format of our PDB-style files is described here.)

Timeline for d3khsd_: